BS31580.complete Sequence
1733 bp assembled on 2012-09-28
GenBank Submission: KX802692
> BS31580.complete
GAAGTTATCAGTCGACATGAGCGAATCCGGTGGCTATCAGAAAATGCCGC
CCGGCTGGGACTGCAAATACGATCAAGCAACTGGAAATTGCTATTACATA
AACTATCTGACGAAGGCCATGCAGCTGGAGGATCCGCGCGGCCGCAGTTA
CAGGCAGTTGCAGAACGAACGCTGTTCCACGGAGTCGATAGCCTTGCAGC
AGTTGGTCAGTCAGCCGCAGACGTCGCACAACAGCTCGCCGTACCACGTC
CATCCCAGCAACAACTTGACTGCAATTCGGGCCTTCCAGGAGCGCCAGCA
ACCCACGCTGCACAACATCTCTACCAGTCCATTGTTGTCGGCCTCCTCCA
GGGGACACTTGGAAATGTCTTCACCTCTGCCCTTTCAACGAGCTCGCGTG
GGACCGAATCTCTCGCGGCGCTCCACCATTCAGGAGACCTCGTTCACCAC
GCAAGCGGAAACGGATGCCGTGGTGACCAAAATCCAGAACATGTTCCCCA
CCGCTGGCGAGAACCATATACGTCTCCTGCTCAAGCGCTACTACAATAGC
GAGGCGGTTGTCGTCAGTGCGCTGCAGGTGGAGAAGCACCCGGTTACCAT
GCCCGGACCCTTTGTGACGCCCCCTTCGCAGCGGCACCTCTTCCACAGCG
GCTCCGCCTTCTACATGACGCCACCGGCACGTCGGCCGGACACGGTAGCT
AGTCGGCGCACGTCGCGCACGGCCAGTCCCCTGCCCGGCGGACGCTTCGG
TAGTCTCGTGAGCGTGCAGAGCGGTCCTGGTGGTCCAAGTGGCCATCAGG
CTGTTCTGCCTCCCAGCTCGGCTGTTCCGCCGGCTCTGCACGGATCGCCC
CTGTGGCGCAGCTCGCCCAGGCCGCACTCGTCGCCCAAGATGAAGCTGAG
ATACATGAAGAATATATTCCCCAAGGCGGACGAAGAGCTGCTTCTGGATA
TCCTGGCAAATGCGGATAACAACGTGCAGTTCGCATCGGAAAAGTTGATT
TCTTTGGGCTACACAAAAAGAGATATGCAACAGCCACACAGACCCAACAA
TCGCCCGCCGGACCTAAATCAAGATCAGGAGGCTGGAGGGGATCAGAGTG
GTGTACATATACCGCTGAGACCCAAGGAATACACAGAGGAAGAGAAGACA
AAAATGCAAACTTTGCTTAAGGAGAAGTACCCACAGATTGCCGAGCGCAT
TATCCTAATGGCTTTGGAATCCGTCAACTATGCAGAGGATAGGGCTACGC
AAATCCTACAAATAGTCCAGGACGAGGACGAGCAGAGGGAGCAAAAGCAG
GCTCCCATGAATCCCAAGCACCTGGATCTTAAGAAAACCACAGGAACCGA
GCAGATCGATGGTGCCAACGAAAAAGACAGACATCGTCAGCACTCCCTTG
GAAATTCGCATAATTCGGAATCAGCTGAATTTCAATCTATTATCGAACGA
ATGGCCAGTTTGGGACCCAATTCCCAGCTAAGCAAGGGTGCAGATGAAAA
TCTTTTGCTAGCCGATTATGTCACCTGGAATGGACCCAACACGAAGCTTC
TTCAAAAGCAGATCACTCAAGGACCTAATGCTAGTCTTCTCACAGATCGC
ACCTATAAGCCAAGGGGTGGGAAATCGGAACTCTGCAAAGGACCCCAGTC
CGGATTGGCGAAGGGCAGCATCTACGCCCAAGGCAGCAACAAGAGCGCCA
ACATCAAATGCAACTAGAAGCTTTCTAGACCAT
BS31580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10508-RK | 2202 | CG10508-PK | 1..1364 | 17..1380 | 6820 | 100 | Plus |
| CG10508-RJ | 2199 | CG10508-PJ | 1..1361 | 17..1380 | 6740 | 99.8 | Plus |
| CG10508-RL | 1338 | CG10508-PL | 521..1338 | 900..1717 | 4090 | 100 | Plus |
| CG10508-RK | 2202 | CG10508-PK | 1866..2202 | 1381..1717 | 1685 | 100 | Plus |
| CG10508-RJ | 2199 | CG10508-PJ | 1863..2199 | 1381..1717 | 1685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10508-RK | 2986 | CG10508-RK | 517..1880 | 17..1380 | 6820 | 100 | Plus |
| CG10508-RJ | 2983 | CG10508-RJ | 517..1877 | 17..1380 | 6740 | 99.8 | Plus |
| CG10508-RL | 2122 | CG10508-RL | 1037..1854 | 900..1717 | 4090 | 100 | Plus |
| CG10508-RK | 2986 | CG10508-RK | 2382..2718 | 1381..1717 | 1685 | 100 | Plus |
| CG10508-RJ | 2983 | CG10508-RJ | 2379..2715 | 1381..1717 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:26:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21213128..21213491 | 537..900 | 1820 | 100 | Plus |
| 3L | 28110227 | 3L | 21213842..21214097 | 899..1154 | 1280 | 100 | Plus |
| 3L | 28110227 | 3L | 21214151..21214376 | 1155..1380 | 1130 | 100 | Plus |
| 3L | 28110227 | 3L | 21215576..21215783 | 1510..1717 | 1040 | 100 | Plus |
| 3L | 28110227 | 3L | 21212781..21212957 | 361..537 | 885 | 100 | Plus |
| 3L | 28110227 | 3L | 21212224..21212389 | 197..362 | 830 | 100 | Plus |
| 3L | 28110227 | 3L | 21215369..21215501 | 1377..1509 | 665 | 100 | Plus |
| 3L | 28110227 | 3L | 21212049..21212158 | 90..199 | 550 | 100 | Plus |
| 3L | 28110227 | 3L | 21210731..21210804 | 17..90 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:26:56 has no hits.
BS31580.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:51 Download gff for
BS31580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10508-RG | 503..2203 | 17..1717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:05 Download gff for
BS31580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10508-RK | 517..1881 | 17..1382 | 99 | <- | Plus |
| CG10508-RK | 2384..2718 | 1383..1717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:25 Download gff for
BS31580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10508-RK | 517..1881 | 17..1382 | 99 | <- | Plus |
| CG10508-RK | 2384..2718 | 1383..1717 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:25 Download gff for
BS31580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21210731..21210804 | 17..90 | 100 | -> | Plus |
| 3L | 21212050..21212158 | 91..199 | 100 | -> | Plus |
| 3L | 21212227..21212388 | 200..361 | 100 | -> | Plus |
| 3L | 21212782..21212957 | 362..537 | 100 | -> | Plus |
| 3L | 21213129..21213491 | 538..900 | 100 | -> | Plus |
| 3L | 21213844..21214097 | 901..1154 | 100 | -> | Plus |
| 3L | 21214151..21214376 | 1155..1380 | 100 | -> | Plus |
| 3L | 21215373..21215501 | 1381..1509 | 100 | -> | Plus |
| 3L | 21215576..21215783 | 1510..1717 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:05 Download gff for
BS31580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21205150..21205258 | 91..199 | 100 | -> | Plus |
| arm_3L | 21203831..21203904 | 17..90 | 100 | -> | Plus |
| arm_3L | 21205327..21205488 | 200..361 | 100 | -> | Plus |
| arm_3L | 21205882..21206057 | 362..537 | 100 | -> | Plus |
| arm_3L | 21206229..21206591 | 538..900 | 100 | -> | Plus |
| arm_3L | 21206944..21207197 | 901..1154 | 100 | -> | Plus |
| arm_3L | 21207251..21207476 | 1155..1380 | 100 | -> | Plus |
| arm_3L | 21208473..21208601 | 1381..1509 | 100 | -> | Plus |
| arm_3L | 21208676..21208883 | 1510..1717 | 100 | | Plus |
BS31580.pep Sequence
Translation from 16 to 1716
> BS31580.pep
MSESGGYQKMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQN
ERCSTESIALQQLVSQPQTSHNSSPYHVHPSNNLTAIRAFQERQQPTLHN
ISTSPLLSASSRGHLEMSSPLPFQRARVGPNLSRRSTIQETSFTTQAETD
AVVTKIQNMFPTAGENHIRLLLKRYYNSEAVVVSALQVEKHPVTMPGPFV
TPPSQRHLFHSGSAFYMTPPARRPDTVASRRTSRTASPLPGGRFGSLVSV
QSGPGGPSGHQAVLPPSSAVPPALHGSPLWRSSPRPHSSPKMKLRYMKNI
FPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDL
NQDQEAGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMAL
ESVNYAEDRATQILQIVQDEDEQREQKQAPMNPKHLDLKKTTGTEQIDGA
NEKDRHRQHSLGNSHNSESAEFQSIIERMASLGPNSQLSKGADENLLLAD
YVTWNGPNTKLLQKQITQGPNASLLTDRTYKPRGGKSELCKGPQSGLAKG
SIYAQGSNKSANIKCN*
BS31580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:53:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10508-PK | 733 | CG10508-PK | 1..454 | 1..454 | 2378 | 100 | Plus |
| CG10508-PJ | 732 | CG10508-PJ | 1..453 | 1..454 | 2361 | 99.8 | Plus |
| CG10508-PL | 445 | CG10508-PL | 174..445 | 295..566 | 1410 | 100 | Plus |
| CG10508-PL | 445 | CG10508-PL | 1..175 | 1..175 | 920 | 100 | Plus |
| CG10508-PI | 329 | CG10508-PI | 1..158 | 297..454 | 814 | 100 | Plus |
| CG10508-PK | 733 | CG10508-PK | 622..733 | 455..566 | 581 | 99.1 | Plus |
| CG10508-PJ | 732 | CG10508-PJ | 621..732 | 455..566 | 581 | 99.1 | Plus |
