BS31584.complete Sequence
3383 bp assembled on 2012-09-14
GenBank Submission: KX802053
> BS31584.complete
GAAGTTATCAGTCGACATGCTATCCGCAACTTTGGGGGCCAATGGCGGCT
CTCAGCCGCTCAGTCCCTCCGCCCAGGCGACGCTCAGCAAGCACCTGCCG
CGCCTCCAGTCGAAGCGTCTTCTCCAGCAGACGCAGTTGCAGTCGCCGGC
TGCCGCCAGACCACAGACCTGCGATGCCAGCTGCCTGACGGAGCTGTGCA
GCAGCGAGAATTTGCCCGAGGTGGAGATTTTCTCACTGCTGGAGGAGCAG
ATACCCAAGTACAAGGTGCGCAACGATTTCCTCACAAACTTCTCGGGCTA
TGCGAATGAGGACTGGTTCGTTCCGGCACCAGCGCTGCCCATTCCGCCGG
AGGGTCTGGGCTTGACCAAGGAGCAGACAAGAGAGTGCCTAAACTATTTC
CTTCTATGCGGCAACCGCGTTAGCCAAATGACTCGGGCGTACGATGACAT
TGAGGCCGTGACGCGACTGCTGGAGGAGAAGGAGAAGGACCTAGAGCTGA
CCGTGCAGATTGGCAAAGAGCTGCTCACCCAGAACAATGCACTCGAGGCA
CGGGTCGCGGATCTGGAAACCGATCTCAAGGCCTCCAACGACGATCGTGC
CCAGCTGGTCCACGAGCTGCACAAGAAGAACGAGCTCATCTCTGTGCTTA
CCAACGATGCAGACGATGGCACAGATACTGACACTCCCACCATGTCGAAG
TCTATAACTTTGGATCTACTGCAGCGCAAGGTCAACTCCCTGCTCGACGA
GAACAAGTCTCTGAAATGCGAAGCCACCCAACTGGCCCACCAGACGGACG
AGGTGGAGGAGCACGAGCGCCAGCTGATGGCCGATATCAGTGCTCAGCTA
AACGATGCTAACTCACAGTACGACAACCTCAGTTTGGAGTTGGAACGGCA
GCGGGAGGAAAACCGGCTGCAACATGAGCAGATCGTGAACCTGACCGCTC
GCCTAGCGGAGGCGGAAATGCGACTACACCAACTGACGCAAGACAACGAC
GAACATCTCTCGCTGCTGCACGTGACGAAAGAAAACCAAAATGCTTTGGC
CCTGGAACTGGTGGAGTTCAAGCAGCGTTACGAAGAGGTGCTCGCTCTGC
TGCACTCTGCTCAGGATCAGCTGAAGCAACAGCGAAAGCGGTCGCAGCCA
CAGGCAAGGAGCTCCTTCCTCGGTGGCCTTGGAACAAGTGGCGCTGGCAT
GGGCGGCAGTCTTTTCCCGCCGGATTCACTGCACTGTGAGCTTATGGAGT
CTTCACTGTACTCAGAGAATAGCCTAGACTCTGGCATATCCGGCGACAGT
CAGCGATCAGCGGACCGCATTAGCCGCATGATGATGCACATGCCGTCCGG
CGGCATGAGCTCGTCGACAATGGGAGGTAGCGTGTATGCGGGAGCTGGCA
ATGTGCCGCCATACAAGCGGGTATTCGACACAGTGCGATGTGCCGGCAAG
AGCGGCAACTACATGGACAGCGGCAACGTGTCGATGACGCAACTGGGAGC
TATGTCGATGAGCAGCTCTTCGGGGCCGCGCATGGCTTCGATGGCGTATC
CAGCGGGCTCCTACTATCGTGGCGGTAGCAATCAATCTCTGGGAGTTAAA
ACTCTGTCAAGCGAGAGTCTCAACTCCCAGTCGGATGACGGTTATCCAGC
CCAGCCCTCTGGTGTGCCAGGAGCGCCCGGCGCCAAGGAGCTGGAGGCGG
CTCTCAAGAGGCTGACGCCGGCTGAGGTCTTGGCTCGCCGTGCTATGTTG
TCCTATGCTCCGGCTGGAACCTATAACTACGACGAACCAATGGGTCACGG
TACAGGTAACGTTCGAAACTCGGATCTACCGCTGGGTGTGCGCACGCCGG
ACAGTATTATGTCCACCGGCTCGTCGGGAATGTCGGGCTCCACGAATCAC
ATGTCCGCTTCGATGACGCATCAGTGGCGACTACCCGAGAAGCTGCAGAT
CATCAAACCCATGGAGGGATCGCAGACATTGCACCATTGGTCGCGCTTGG
CCACGCCCACGCTCAGTGGACTGCTGGATGAGCGTCCCGGCGTAACGATC
CGTGGTGGACGTGGCCTGGATGATCTGGGAATGCAGATATACACGCTGTC
GGACGTAGAGGAGGATGTTAGCGATGATCTGCCCGGCAAACAGTTTGAAG
CACCGGGCTGCACGTTCACCTACACCAATAGCATGGTCATGCATCCGGAC
GATGGATTCGTTAACGATCTGTCATTCCTCTCGCAGTCGCAGATGTCGTC
CCGAATGGCCTCCACGTCGACATCAAGGCAACCCAGTTGTCCTGCCACGC
CTCGCGCTGGACTATCGCGCAAAAATTCCTGCTCCACATTTTCGGTGAAC
CTCGGACTCGCTGGAATGCTGAATGAGAGGGGCATCAAGGCGGTGACGCC
CAGTGCCCTCAACACGCCCGCCGGACCTAACTTTTCGCCCACGGTGACGC
CATGCAACAGCCCGGAGGGATCACCTCCTCGTGCCCAGTCGCCCGAGCCG
CTCTTTGGTCTGCTCTCGTGTGGTGCGGATTTGATCCGGCGCAAAATCGT
AGGCGATCAGCATCAGCAGCAGCAACAGAAGCAAAGGAGCAGCCTTAGCA
AGCAGCAGCAGCAGAAGATCATGCTCTCGCACCTGGAAAGACGTGCCCTG
CGATCGCTGAACCTAATTGAGAAGGTGGAGAGCATCGGACTGGAGAACAT
AATAAGCGCACAGAGAGGCCTTGGCTCAGGAATCGCGAACCGCAGCAGTT
CGCCCCTGAGCAGTGGCAGCCTACAGAGTCTCCACACCAGCAGCAACAGC
ATTGTGGACGACATACACTTCGATCGGGCACAGATCAAGGGTGTCCTGCA
TCGAGGCCTGAAATCGCCAACGCCCGCAACAGCATCAACATCTGCAGCTG
CGGCGGCTTCAGGGCCAGGTATCTCGACGAGCAGCAGCACGAGTGCTTAC
AATAGCGATGATAGCGACGATCAGGGCTTGGTAATGAAAATCAAACCGTC
GAAGAGCGCGACACCCACAACAACAGGAGCAGCACAAAGTCAGCCAAGTT
CGGCGACGACATCCAACGGCACGGCGAGTGAAACGCGACTGAAGCAGATG
CAGCGCCAGAAATCGCGCAGGCAGCTAAAGAACGGAATGGCCAACCAGAG
GCCAGATCTGGGCACAATTTCTGGCGCCGGAGGAGGCGGACGAGTGCGCC
CGGATCTGGGAAAGGTAGCCGACAGCGGCAGCAGCAGCAAGCTCAGCACC
AAGCGAAGTGAGGCTAAGCCTGCGGAGGAGGAAGAGGCGACACCACAGAC
CATCACACAGGCGTTTGTGGGTTCAGTTAGTTCCTTGCTCTTTGGCCGCA
AGGGCGGTTGGCTGTAAAAGCTTTCTAGACCAT
BS31584.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| milt-RC | 3351 | CG43227-PC | 1..3351 | 17..3367 | 16740 | 100 | Plus |
| milt-RA | 3351 | CG43227-PA | 1..3351 | 17..3367 | 16740 | 100 | Plus |
| milt-RF | 3771 | CG43227-PF | 806..3771 | 402..3367 | 14815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| milt-RC | 5482 | CG43227-RC | 678..4030 | 17..3369 | 16750 | 100 | Plus |
| milt-RA | 4231 | CG43227-RA | 590..3942 | 17..3369 | 16750 | 100 | Plus |
| milt-RF | 5469 | CG43227-RF | 1050..4017 | 402..3369 | 14825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7051759..7053365 | 680..2286 | 8035 | 100 | Plus |
| 2L | 23513712 | 2L | 7053473..7054558 | 2284..3369 | 5415 | 99.9 | Plus |
| 2L | 23513712 | 2L | 7051367..7051645 | 402..680 | 1395 | 100 | Plus |
| 2L | 23513712 | 2L | 7040949..7041159 | 191..401 | 1055 | 100 | Plus |
| 2L | 23513712 | 2L | 7040606..7040780 | 17..191 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:09:52 has no hits.
BS31584.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-14 10:36:31 Download gff for
BS31584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RC | 415..3763 | 17..3365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:37 Download gff for
BS31584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RA | 590..3938 | 17..3365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:29 Download gff for
BS31584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RA | 590..3938 | 17..3365 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:29 Download gff for
BS31584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7040606..7040780 | 17..191 | 100 | -> | Plus |
| 2L | 7040950..7041159 | 192..401 | 100 | -> | Plus |
| 2L | 7051367..7051645 | 402..680 | 100 | -> | Plus |
| 2L | 7051760..7053365 | 681..2286 | 100 | -> | Plus |
| 2L | 7053476..7054554 | 2287..3365 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:37 Download gff for
BS31584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7040606..7040780 | 17..191 | 100 | -> | Plus |
| arm_2L | 7040950..7041159 | 192..401 | 100 | -> | Plus |
| arm_2L | 7051367..7051645 | 402..680 | 100 | -> | Plus |
| arm_2L | 7051760..7053365 | 681..2286 | 100 | -> | Plus |
| arm_2L | 7053476..7054554 | 2287..3365 | 99 | | Plus |
BS31584.pep Sequence
Translation from 16 to 3366
> BS31584.pep
MLSATLGANGGSQPLSPSAQATLSKHLPRLQSKRLLQQTQLQSPAAARPQ
TCDASCLTELCSSENLPEVEIFSLLEEQIPKYKVRNDFLTNFSGYANEDW
FVPAPALPIPPEGLGLTKEQTRECLNYFLLCGNRVSQMTRAYDDIEAVTR
LLEEKEKDLELTVQIGKELLTQNNALEARVADLETDLKASNDDRAQLVHE
LHKKNELISVLTNDADDGTDTDTPTMSKSITLDLLQRKVNSLLDENKSLK
CEATQLAHQTDEVEEHERQLMADISAQLNDANSQYDNLSLELERQREENR
LQHEQIVNLTARLAEAEMRLHQLTQDNDEHLSLLHVTKENQNALALELVE
FKQRYEEVLALLHSAQDQLKQQRKRSQPQARSSFLGGLGTSGAGMGGSLF
PPDSLHCELMESSLYSENSLDSGISGDSQRSADRISRMMMHMPSGGMSSS
TMGGSVYAGAGNVPPYKRVFDTVRCAGKSGNYMDSGNVSMTQLGAMSMSS
SSGPRMASMAYPAGSYYRGGSNQSLGVKTLSSESLNSQSDDGYPAQPSGV
PGAPGAKELEAALKRLTPAEVLARRAMLSYAPAGTYNYDEPMGHGTGNVR
NSDLPLGVRTPDSIMSTGSSGMSGSTNHMSASMTHQWRLPEKLQIIKPME
GSQTLHHWSRLATPTLSGLLDERPGVTIRGGRGLDDLGMQIYTLSDVEED
VSDDLPGKQFEAPGCTFTYTNSMVMHPDDGFVNDLSFLSQSQMSSRMAST
STSRQPSCPATPRAGLSRKNSCSTFSVNLGLAGMLNERGIKAVTPSALNT
PAGPNFSPTVTPCNSPEGSPPRAQSPEPLFGLLSCGADLIRRKIVGDQHQ
QQQQKQRSSLSKQQQQKIMLSHLERRALRSLNLIEKVESIGLENIISAQR
GLGSGIANRSSSPLSSGSLQSLHTSSNSIVDDIHFDRAQIKGVLHRGLKS
PTPATASTSAAAAASGPGISTSSSTSAYNSDDSDDQGLVMKIKPSKSATP
TTTGAAQSQPSSATTSNGTASETRLKQMQRQKSRRQLKNGMANQRPDLGT
ISGAGGGGRVRPDLGKVADSGSSSKLSTKRSEAKPAEEEEATPQTITQAF
VGSVSSLLFGRKGGWL*
BS31584.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| milt-PC | 1116 | CG13777-PC | 1..1116 | 1..1116 | 5672 | 100 | Plus |
| milt-PA | 1116 | CG13777-PA | 1..1116 | 1..1116 | 5672 | 100 | Plus |
| milt-PB | 1122 | CG13777-PB | 119..1122 | 112..1116 | 5013 | 98.9 | Plus |
| milt-PF | 1256 | CG43227-PF | 262..1256 | 122..1116 | 5005 | 99.4 | Plus |
| milt-PD | 1256 | CG43227-PD | 262..1256 | 122..1116 | 5005 | 99.4 | Plus |
