BS31589.complete Sequence
4334 bp assembled on 2012-09-14
GenBank Submission: KX805837
> BS31589.complete
GAAGTTATCAGTCGACATGGAAGCCACAAATTGGAAGCAATCGCATCGAA
GGATTCACGCACTAATCCTTATCCTTTGGATCGCTGGGGTGCAAGGACAA
ACCGTTGGTTCCCTGGTGGCAGTGAGTGAGAGCCAGGAACTGGCGGAGAA
GGTGGAGGTGACTGTGGTTTCTACGGTCTACACACTCGGCTTTAGCATCT
CCAACGAGGCGGACTACTCCATCGATAAGGTGATCTGTCGCAATGGATCC
GGATCGGAAACCGAGGCCAACGCAGCGCACGTTTGTGAAAACCTTAATCC
TTGCACCTTCTACACATCGGTGGTTTCATTCCGTTCGAATGTCTCCGGCA
AACCACCGCCTTCTGACCAAACCATCTATGCCTACACTGAATATAAGCAG
CCCAAGACCACAGTGACCTCAGTGGTGGCCACAGCGAACACCATCAAAGT
GACCTGGCAGACGAACGACCGCGCCTGTGTGGAGTCCTTTGGCATCACGG
CAAAGGCGACGGACTACACCAAATCCTTTCAGCTGCTAAACGATAAAAGT
TCTCAGACTTTCGTGAATTTAAGCGCCTGCCTAACGCACACGATCACCCT
GGACACGCGAAACAACGCTAGCGTTGTGGTGGACACGGATGCCACCGATG
TGGACACACAGTACGCGGAGCCCGGCGATCTCGTCATGAACGTAACGAAC
CTAGCCAGTGGCATCACGATGATCACGTGGGGAGATCCCTCCGAGAAGAA
CTGCATCAGTAACTATGTCTTCAAGTGGCAACGCAACGATTGCGGAACGG
ATCAAAATCAGGATACCACCACGGATGTGCCCAGTACGGAAACTACGAAC
GAGATTGACTACGTTACCACCACACCAATGGAGACCACACCCGATACGCC
CAGTGATGAAGTTAAGTGCGAGTGGACCGATGTCTCCTCCGATGGCAAGC
TGAGGGAGTACCTCCTGACCGATCTTCAAGGATGTGATTTGTACACCTTT
CAGGTTTTCATCAACGAGAACAGCACGGCCAAGGCTTCTCAGACTTTTAC
TTCGGCAGAAAAGTTGGTCAGTGCCGTCTATGAACCCAGTCCCACCGCCT
ATCCCACCCAGTTGCATTGGACTTGGTTCTCTCCACAAAATCATCCCAAA
TGTGTGGCTAACTATAGTGTAACGCTGACCGGACCCATTCAACGATCGGA
AAACAAAACTATGAATGTGATCACAGAGGAGACATTCGCTATCTTCGACG
ACCTTGATCCGTGTGGAATATATTTGGTGGAGATTGTGCCCAATCAGCTA
AATGGAAGCGCTGGCACCAAGTACCAGGAGCAGAGCACCGTGGGCGAGGA
TCAGCCATCTGTGATTCAAGATCCCGTCGTGGAAGCAGAAGCCTACTCGA
TGGAGGTGAGCTGGAAGACGCCCGAGTACGCCGATCTCTGCATCGATGGC
TACCGATTGTCCGGCTGGATGGAGGACGATAAGCTGGTTGAGGTTGAAGC
ACTTAGTATTACCACCCAGAATACGACGGTTGTTTTCGACAAGAATCTGC
TGGCCTGTCAGGTGTACATCATTCAGATAATCCCATACACCAAGGAGAAC
CTCGATGGTCAGCTGAGACAGGTTGGTGTGGAGACCAAAGCAGCTATAGT
TGATTACACTAAGGTCAAGCTGGAAATGAAGAATGCTGGCTCCGAATTTA
TTGATTTAATCGCCTTCAATGCGGACTACAACAATTCCTGTCCGACGATC
TTTGCGCTCTTCACGTGCAATGCCACCACCCAGGTGCGAAATCCATACGC
GGAGCGTTATGTGGAGGGACATAGCAAACAAGGTTTTAATGCCAGTCTAA
GTCCACTTTCCCCCTACGCCACCTACGTTTGCAAAGTAATACTCTACAAT
GTGGCAGGACCTTCCGAACCAGTTGTCGATGCTGATATGCACACCACAAC
CTACTTTCCCGAGCAGCCGGAGAGTGTGATGCTGGAGAAGAGCACTGTCA
GCAGCCTGCTGTTCAACTGGCAACCGCCCACCTACACAAACGGACCCATC
AAGTACTACCAGGCATTCCTGATGCGTCACGAGGCCAGCTACTTTGTGCC
CGCGGATTGCGCGATAGTCGAGCAGGACACCAAGTCGGAGACCAAGGGTG
ATCCTAGTGTAAACTTCACGGGTCTGGCTCCAGCTGTGCGATACATGATG
CAAGTTGCGGCACAAAATGACTTCGGAATGGGCGTCTATACAGAACCCGT
AATTGGTATCACTTTGCCAGCAGTATCCGATAGCGTGACCCAGTTGACCG
TACTAACCCAGGGTCCGGTGAACAATAACGCCGTGTACGAAGCGAACGTG
ACTATCACGTGGAAGGTGCCCTGCAAGTCCAATGGCGATATCGAGTATTT
CCAGCTGGCTTTCAATGGCACACGAAATAACTTCGCTCCAGTTTCATTTG
AACGGCGGGTGGAACTGGACACGGGGAATAAGCAGGGACGGATGTCCTAC
ACGGAAACGGAAATGCAGCCACAGTTCGACTATACGGTTGAGGTGTCCGT
AAAGAATCGCGATGTGGAACAGTTGAGCAGCAGTGTACCGGGTAGCTGGC
AATCGCCAGCGGGACTGCCCACCATTCCGAGTGATGAGCTTATCAAGCAA
ATGCGCGCCAATGTCGAGGAGACATCTAATCCAACGAAAACGGCCATTGT
TCGCCTTCCAGCCGACATCATGACATCCGCATCCGGCGACATCAAGTGGA
TGGCACTGATGATCTCGCAAAAGAACTGTGCTGGAGTTCCACACCTCAAA
TACGATGTCAGCAGCGATTGGCCAAAGGTTCTATCCTATCAAGAGGCCGG
CGCAGATGGCACAGGTGACTGCAGTCTGGAGTACCAAACCACCGAGGAGC
GCTGGCATCCCGAACCCGTTCAACGTCAGCGAAGGGATGGAGAGGTGACA
TCCGATGAGGAAATTGTTTTTACCATCGGATTGGACAAGTGTTCGGAGGT
TCAGAAAACGTATTGCAATGGACCTTTGTTACCAGACACGGATTACAATG
TTGTGGTGAGACTGTTCACCGCATCTGGTTATAGCGATGCCGCCGTACTC
AACTTTAAGACCAAGGCGGCCATCAAGGTGACCCTGATCCTGGTGAGCGT
TTGCAGTTGCCTGCTGCTGGCCTTCGTACTTGGTTTGACGGTTCTCTGGG
TGCGCAAGCGATTGGCCTGGAAACGTGATTCTGGTCAGGGTATCGAGGAT
CCATTTGGCAATGTCATTGCCAAGAACTTTGCCATCTTTTATACCGAAGT
TGCCAAGCCGGAGAAACTGGCCAGGGAGTTCAAGGAGATCACCGTTGTGG
CCTTGGAGCTCAGCTATTCCGCCTCCGAATTGGGTTGCCACAAGAATCGC
TATGCGGACATATTTCCTTATGACAAGAATCGCGTGATTCTGGACATCGA
TGCGGAGGGATCGGACTACATCAATGCCTCCTTCATAGATGGTCACACGC
GTAAGAAGGAGTACATAGCCACCCAGGGACCAAAACCAGAGAGTGTGATG
GACTTTTGGCGCATGATCCTGCAGTACAACGTGCGGGTTATTGTTCAAGT
TACCCAGTTTCGCGAGGGCAATACGATCAAGTGTCACGAGTACTATCCGT
ATAATGTGCGTGGATTGACTGTGACTATCAAGTCCAAGGAGGTTCTGGAG
CTGTACGATCGAACTGAGTTGACTGTTGTGCACGACAAGTACGGACTGAA
GGAGAAGGTGATCCACTACTATTTCAAAAAGTGGCCCGATCACGGCGTGC
CCGAGGATCCCATGCATTTGATTATGTTTGTGAAGAAGGTGAAGGCGGAG
AAGCGACCCAGTTACTCGCCCATTGTCGTCCATTGCAGTGCGGGAGTGGG
CAGGACGGGCACGTTTATTGGCCTGGATCTGATCATGCAGCGATTGAAGA
GCGAGTCGAAAATCAACATTTTCGAAACGGTCAAAAAGCTGCGATTCCAG
CGCATGAAAATGGTGCAAACGCAGCAGCAGTACACATTCCTCTACGCCTG
CACCTATGAGCTGGTCAAGCATAAGATACCCAGAGCTGCGTTGAAAATGG
ATGGGCGTCCCAAGTCCGTGACCGTGCCCGCCATTCCCTCTCCCAAAAAG
GTGAGCTTTCCGGACGTGGATGTGGGCAGTGAGTATGTGTCATCCGCACC
GATCACCGATTTGGATGACGGTAGGCCCATCGTGCAGCTGCCTTCTAGGT
TCTCCGGACTGCGGAGGAATAGTCCACCGGGCGAAAACGATAACCCAACT
AGCAGCAGCAATATGTGAAAGCTTTCTAGACCAT
BS31589.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp52F-RB | 4302 | CG18243-PB | 1..4302 | 17..4318 | 21510 | 100 | Plus |
| Ptp4E-RH | 5286 | CG6899-PH | 4558..4630 | 3869..3941 | 200 | 84.9 | Plus |
| Ptp4E-RG | 4848 | CG6899-PG | 4558..4630 | 3869..3941 | 200 | 84.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp52F-RB | 4589 | CG18243-RB | 158..4459 | 17..4318 | 21510 | 100 | Plus |
| Ptp4E-RH | 6059 | CG6899-RH | 4856..4928 | 3869..3941 | 200 | 84.9 | Plus |
| Ptp4E-RG | 6060 | CG6899-RG | 4856..4928 | 3869..3941 | 200 | 84.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16172636..16173240 | 3220..2616 | 3025 | 100 | Minus |
| 2R | 25286936 | 2R | 16175486..16175998 | 911..399 | 2565 | 100 | Minus |
| 2R | 25286936 | 2R | 16171618..16171993 | 4000..3625 | 1880 | 100 | Minus |
| 2R | 25286936 | 2R | 16173310..16173653 | 2615..2272 | 1720 | 100 | Minus |
| 2R | 25286936 | 2R | 16171242..16171562 | 4318..3998 | 1605 | 100 | Minus |
| 2R | 25286936 | 2R | 16173725..16174042 | 2273..1956 | 1590 | 100 | Minus |
| 2R | 25286936 | 2R | 16174539..16174851 | 1665..1353 | 1565 | 100 | Minus |
| 2R | 25286936 | 2R | 16174916..16175203 | 1352..1065 | 1440 | 100 | Minus |
| 2R | 25286936 | 2R | 16172374..16172578 | 3423..3219 | 1010 | 99.5 | Minus |
| 2R | 25286936 | 2R | 16174296..16174469 | 1834..1661 | 870 | 100 | Minus |
| 2R | 25286936 | 2R | 16175269..16175423 | 1064..910 | 775 | 100 | Minus |
| 2R | 25286936 | 2R | 16176233..16176368 | 285..150 | 680 | 100 | Minus |
| 2R | 25286936 | 2R | 16172051..16172185 | 3625..3491 | 675 | 100 | Minus |
| 2R | 25286936 | 2R | 16176521..16176653 | 149..17 | 665 | 100 | Minus |
| 2R | 25286936 | 2R | 16174108..16174232 | 1955..1831 | 625 | 100 | Minus |
| 2R | 25286936 | 2R | 16176059..16176172 | 398..285 | 570 | 100 | Minus |
| 2R | 25286936 | 2R | 16172245..16172316 | 3491..3420 | 360 | 100 | Minus |
| X | 23542271 | X | 4953294..4953366 | 3869..3941 | 200 | 84.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:10:08 has no hits.
BS31589.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-14 10:36:32 Download gff for
BS31589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp52F-RC | 1..4301 | 17..4317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:40 Download gff for
BS31589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp52F-RB | 158..4458 | 17..4317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:34 Download gff for
BS31589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp52F-RB | 158..4458 | 17..4317 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:34 Download gff for
BS31589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16172378..16172577 | 3220..3419 | 100 | <- | Minus |
| 2R | 16171243..16171559 | 4001..4317 | 100 | <- | Minus |
| 2R | 16171618..16171992 | 3626..4000 | 100 | <- | Minus |
| 2R | 16172051..16172185 | 3491..3625 | 100 | <- | Minus |
| 2R | 16172246..16172316 | 3420..3490 | 100 | <- | Minus |
| 2R | 16172637..16173240 | 2616..3219 | 100 | <- | Minus |
| 2R | 16173310..16173651 | 2274..2615 | 100 | <- | Minus |
| 2R | 16173725..16174042 | 1956..2273 | 100 | <- | Minus |
| 2R | 16174108..16174230 | 1833..1955 | 100 | <- | Minus |
| 2R | 16174298..16174466 | 1664..1832 | 100 | <- | Minus |
| 2R | 16174541..16174851 | 1353..1663 | 100 | <- | Minus |
| 2R | 16174916..16175203 | 1065..1352 | 100 | <- | Minus |
| 2R | 16175269..16175421 | 912..1064 | 100 | <- | Minus |
| 2R | 16175486..16175998 | 399..911 | 100 | <- | Minus |
| 2R | 16176059..16176171 | 286..398 | 100 | <- | Minus |
| 2R | 16176233..16176368 | 150..285 | 100 | <- | Minus |
| 2R | 16176521..16176653 | 17..149 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:40 Download gff for
BS31589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12063738..12063873 | 150..285 | 100 | <- | Minus |
| arm_2R | 12064026..12064158 | 17..149 | 100 | | Minus |
| arm_2R | 12058748..12059064 | 4001..4317 | 100 | <- | Minus |
| arm_2R | 12059123..12059497 | 3626..4000 | 100 | <- | Minus |
| arm_2R | 12059556..12059690 | 3491..3625 | 100 | <- | Minus |
| arm_2R | 12059751..12059821 | 3420..3490 | 100 | <- | Minus |
| arm_2R | 12059883..12060082 | 3220..3419 | 100 | <- | Minus |
| arm_2R | 12060142..12060745 | 2616..3219 | 100 | <- | Minus |
| arm_2R | 12060815..12061156 | 2274..2615 | 100 | <- | Minus |
| arm_2R | 12061230..12061547 | 1956..2273 | 100 | <- | Minus |
| arm_2R | 12061613..12061735 | 1833..1955 | 100 | <- | Minus |
| arm_2R | 12061803..12061971 | 1664..1832 | 100 | <- | Minus |
| arm_2R | 12062046..12062356 | 1353..1663 | 100 | <- | Minus |
| arm_2R | 12062421..12062708 | 1065..1352 | 100 | <- | Minus |
| arm_2R | 12062774..12062926 | 912..1064 | 100 | <- | Minus |
| arm_2R | 12062991..12063503 | 399..911 | 100 | <- | Minus |
| arm_2R | 12063564..12063676 | 286..398 | 100 | <- | Minus |
BS31589.pep Sequence
Translation from 16 to 4317
> BS31589.pep
MEATNWKQSHRRIHALILILWIAGVQGQTVGSLVAVSESQELAEKVEVTV
VSTVYTLGFSISNEADYSIDKVICRNGSGSETEANAAHVCENLNPCTFYT
SVVSFRSNVSGKPPPSDQTIYAYTEYKQPKTTVTSVVATANTIKVTWQTN
DRACVESFGITAKATDYTKSFQLLNDKSSQTFVNLSACLTHTITLDTRNN
ASVVVDTDATDVDTQYAEPGDLVMNVTNLASGITMITWGDPSEKNCISNY
VFKWQRNDCGTDQNQDTTTDVPSTETTNEIDYVTTTPMETTPDTPSDEVK
CEWTDVSSDGKLREYLLTDLQGCDLYTFQVFINENSTAKASQTFTSAEKL
VSAVYEPSPTAYPTQLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMN
VITEETFAIFDDLDPCGIYLVEIVPNQLNGSAGTKYQEQSTVGEDQPSVI
QDPVVEAEAYSMEVSWKTPEYADLCIDGYRLSGWMEDDKLVEVEALSITT
QNTTVVFDKNLLACQVYIIQIIPYTKENLDGQLRQVGVETKAAIVDYTKV
KLEMKNAGSEFIDLIAFNADYNNSCPTIFALFTCNATTQVRNPYAERYVE
GHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQ
PESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCAI
VEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMGVYTEPVIGITL
PAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGDIEYFQLAFN
GTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDV
EQLSSSVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPTKTAIVRLPAD
IMTSASGDIKWMALMISQKNCAGVPHLKYDVSSDWPKVLSYQEAGADGTG
DCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYC
NGPLLPDTDYNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLL
LAFVLGLTVLWVRKRLAWKRDSGQGIEDPFGNVIAKNFAIFYTEVAKPEK
LAREFKEITVVALELSYSASELGCHKNRYADIFPYDKNRVILDIDAEGSD
YINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFRE
GNTIKCHEYYPYNVRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIH
YYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTF
IGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELV
KHKIPRAALKMDGRPKSVTVPAIPSPKKVSFPDVDVGSEYVSSAPITDLD
DGRPIVQLPSRFSGLRRNSPPGENDNPTSSSNM*
BS31589.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp52F-PB | 1433 | CG18243-PB | 1..1433 | 1..1433 | 7517 | 100 | Plus |
| Ptp4E-PB | 1607 | CG6899-PB | 954..1588 | 715..1353 | 541 | 26.9 | Plus |
| Ptp4E-PG | 1615 | CG6899-PG | 954..1588 | 715..1353 | 541 | 26.9 | Plus |
| Ptp4E-PH | 1761 | CG6899-PH | 954..1588 | 715..1353 | 541 | 26.9 | Plus |
| Ptp4E-PF | 1767 | CG6899-PF | 954..1588 | 715..1353 | 541 | 26.9 | Plus |
