BS31602.complete Sequence
1649 bp assembled on 2012-09-28
GenBank Submission: KX802365
> BS31602.complete
GAAGTTATCAGTCGACATGGCCCCAGTTCAGAAAATAAATGTTTTTGGTG
AAGCCGATACTGCAGTATCCTCCAAGGATGTGTATTGCATTTGTCGCCAG
AGCCACATCAATGGATTTATGATATGCTGTGACAATTGCAACGAGTGGTT
CCATGGAGATTGCATCGGATTGCCGGCAAATATCGGGGAACAGCACGACA
CCTACTACTGCACCGAGTGTTTTCGCAAAAATCCACTATTAAAGTGCACC
TATAAGAAGAGTCCATCCACCACAGGAGTTCCAAAAACTCCAAAAACTCC
AAAAACTCCAAAAACTCCAAAAAATCCAAAAACTCCAAAGACTCCAAAAA
ATTCAAAAACTCCAAAAACAGCCAGGATTATCAATTCAATCGGTGTCAGG
CAGAATCCACGCAGGAGATCCACGTTCGTCCAGGAGCGTCCTTCAGAAGT
ACCTAATCCAAGCAGACAATCCACGAAGTTACAGAAAGCAGTCAATTATG
AAAATGCTACTGAAGAGCCCACAGAAGACGCTGAAAAGGTGGATCAAAAA
CCAAAAAAGACTGCGAAGAAAAAGAATCCAAAGCCGGAGGATAAAGTCAC
AGACGATGCTCAAAAACCAGCAGTTGAAAAGCTCTTCGAATCGAAGGGAA
CACAATGCAACATGTTTAGGGATTGGTCGAAGTATGTTCCTCCCGAAAAC
TCCAAGAAGAGGGGCACCTGCTTCACAGTCTTTTGCCAGCAATTGGCACG
ATCCTGTTCTAGATACTGTTGCGATGAGTGCGGCAACTTCACCGCAATCA
CAAACGTATTCGCATTAGGCCTTTTACCCAATATGCCAGCAATGAAAGTG
GCAATGGGACACGTTGGTTTATTGCTTGGCAATGACTTAACAAATAATCA
GAAGTCAAACAAAAATTCAGAGGCTTCTGAGTCAAAAACGGAAACCAAGC
CAAAGGTTAAAAAACCAAAATCGGAAGGAAGGAAATCGAGATATCGTAGT
CCGAGCAGTAGCCTGGAAAGAAGCCCAGATGTTTCCCGAACTGCCGCTAA
AAGGCCGAAGCTCCAAGAAGAACTTCCTTCATCTAGCTCTAGAAGCTCAC
GGAAGTTAGTTGAAGAATCTCGATCTGAAACGGAGCGACATAAAGCTAAG
CATAAGACTTCCAAAAAAGAAAAGACTAGTTCCCAGCGAGCTTATTCTCT
GTCGCCTATTCCATCTCCCAAGTCATACAGGGCTGCGAGGAATACATCTG
AAACAGCACCCAATAGTCCTGTTAATCTAAAGAAAACTTTTAAGCAAAAA
CATGTCATTAGCTCACCAACAGGGAAGAAAAGAGTGTGCAGATCACAAAC
AATATCTGCGGATGATCCATTACCTTCTCAACCAAAATCGACTGAAGTTA
GTCCTATGGCAAGTGCGGGGACTTCTTCTAGCAATAAGAAACCTGTGCCT
GAAACCTCTTGCCAAAAATATAGAAAACTATCATTTACTGATGAGAATTG
CGAGAAAATCAAAATCATAAGATGCATTGTGTCCAATATGTCGCCCACCG
AGAAAGCTCTGTTGGCCAGAAAGAGGATGATGATGAAGTTGGCATCGGAG
CAGCACATACGTCAGGCACCAGGTGAAATATAAAAGCTTTCTAGACCAT
BS31602.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3347-RC | 1617 | CG3347-PC | 1..1617 | 17..1633 | 8085 | 100 | Plus |
| CG3347-RB | 1617 | CG3347-PB | 1..1617 | 17..1633 | 8085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3347-RC | 1908 | CG3347-RC | 97..1713 | 17..1633 | 8085 | 100 | Plus |
| CG3347-RB | 2192 | CG3347-RB | 381..1997 | 17..1633 | 8085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3270852..3271611 | 874..1633 | 3800 | 100 | Plus |
| 2L | 23513712 | 2L | 3270044..3270794 | 124..874 | 3755 | 100 | Plus |
| 2L | 23513712 | 2L | 3269913..3269986 | 50..123 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:18:53 has no hits.
BS31602.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 12:11:42 Download gff for
BS31602.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3347-RB | 381..1989 | 17..1625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:34 Download gff for
BS31602.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3347-RB | 381..1989 | 17..1625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:42 Download gff for
BS31602.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3347-RB | 381..1989 | 17..1625 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:42 Download gff for
BS31602.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3269817..3269849 | 17..49 | 100 | -> | Plus |
| 2L | 3269913..3269986 | 50..123 | 100 | -> | Plus |
| 2L | 3270044..3270794 | 124..874 | 100 | -> | Plus |
| 2L | 3270853..3271603 | 875..1625 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:34 Download gff for
BS31602.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3269817..3269849 | 17..49 | 100 | -> | Plus |
| arm_2L | 3269913..3269986 | 50..123 | 100 | -> | Plus |
| arm_2L | 3270044..3270794 | 124..874 | 100 | -> | Plus |
| arm_2L | 3270853..3271603 | 875..1625 | 100 | | Plus |
BS31602.pep Sequence
Translation from 16 to 1632
> BS31602.pep
MAPVQKINVFGEADTAVSSKDVYCICRQSHINGFMICCDNCNEWFHGDCI
GLPANIGEQHDTYYCTECFRKNPLLKCTYKKSPSTTGVPKTPKTPKTPKT
PKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPSEVPNPSR
QSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKVTDDAQK
PAVEKLFESKGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRY
CCDECGNFTAITNVFALGLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKN
SEASESKTETKPKVKKPKSEGRKSRYRSPSSSLERSPDVSRTAAKRPKLQ
EELPSSSSRSSRKLVEESRSETERHKAKHKTSKKEKTSSQRAYSLSPIPS
PKSYRAARNTSETAPNSPVNLKKTFKQKHVISSPTGKKRVCRSQTISADD
PLPSQPKSTEVSPMASAGTSSSNKKPVPETSCQKYRKLSFTDENCEKIKI
IRCIVSNMSPTEKALLARKRMMMKLASEQHIRQAPGEI*
BS31602.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3347-PC | 538 | CG3347-PC | 1..538 | 1..538 | 2837 | 100 | Plus |
| CG3347-PB | 538 | CG3347-PB | 1..538 | 1..538 | 2837 | 100 | Plus |
| CG17440-PA | 366 | CG17440-PA | 31..295 | 15..320 | 211 | 23.5 | Plus |
| Cfp1-PB | 643 | CG17446-PB | 42..283 | 23..265 | 192 | 23.8 | Plus |
| Cfp1-PA | 663 | CG17446-PA | 62..303 | 23..265 | 192 | 23.8 | Plus |
