BS31708.complete Sequence
989 bp assembled on 2012-08-22
GenBank Submission: KX802242
> BS31708.complete
GAAGTTATCAGTCGACATGATAGAACGGGAAATTATCCACACAACACCTG
CCTCGAAGCGCATCTTCGACGTCCTCAAGGATGTCCTGCAATTTTTCGAG
CTCTATGTGCGAATTCTGTTGGAGCTGTTTGTGTCGCTGGTGCAGATTGT
GCTGCCCAAAAAGCAGAAGGATGTCAGCGGGGAGATAGTTTTGATAACCG
GAACTGGGCATGGAATTGGTCGGGAGTTGGCCCTACACTATGCTTCATTG
GGTAGCACAGTGGTTTGTGTGGATATCGATGGCAAAAATAATCTGCAGAC
GGTGGAGAAGGCCAAACGGCTCAATCTCGGCGAGGTTTACAGCTACAGCT
GCGATGTTTCCAAGCGCGATGAGGTTACGGCACTGGCGGATCGGATCAAG
TCGGATGTTGGATGCATATCGGTGCTGGTTAATAATGTGGGCATAATGCC
AACGCATCCCATTCTGCAGCAATCGGCCGAGGAAATCCAGCGGGTCTTCG
ACGTGAACGTGTTCTCGCAGTTCTGGACCATCCAGGCCTTCTTGCCGCAC
ATGCAGGAGAAGTGTCGTGGCCACATCATTTGCATGTCCTCCATTGCCGG
CTTGGTGGGCATCTCCAACCTGGTGCCCTATTGTGCCACCAAATTCGCTG
TACGCGGTCTGATGGAGGCACTGCATGCCGAATTACGACAGGGACCTTTC
AGGGATCTGATTCGAACCACCACCATCTTTCCCTATATGACCAACACTGG
CCTCTGCAAGCATCCCAAGGTGAAGTTCCCATCGATCCTGGGCCTGCTCG
ATCCCAAGCAGGTGGCCAAAAGGATCGTGGAGGCTCATCGCACCGACCTC
ATGGAGGTAACCATCCCGAGCTGCCTCCTCTACATCAACAACTGGACGCG
ACTCCTGCCCGATCATTGCGGCCTGATGCTTAAGGACTTTATCGACAGCG
GTGTGGAGTCGGATTTGATTTAGAAGCTTTCTAGACCAT
BS31708.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14946-RE | 957 | CG14946-PE | 1..957 | 17..973 | 4785 | 100 | Plus |
| CG14946-RC | 957 | CG14946-PC | 1..957 | 17..973 | 4785 | 100 | Plus |
| CG14946-RD | 957 | CG14946-PD | 1..957 | 17..973 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14946-RE | 1249 | CG14946-RE | 208..1165 | 16..973 | 4790 | 100 | Plus |
| CG14946-RC | 2524 | CG14946-RC | 1483..2440 | 16..973 | 4790 | 100 | Plus |
| CG14946-RD | 1386 | CG14946-RD | 279..1236 | 16..973 | 4790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12063929..12064292 | 709..346 | 1820 | 100 | Minus |
| 2L | 23513712 | 2L | 12063607..12063871 | 973..709 | 1325 | 100 | Minus |
| 2L | 23513712 | 2L | 12064350..12064505 | 348..193 | 780 | 100 | Minus |
| 2L | 23513712 | 2L | 12064562..12064719 | 197..40 | 775 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:37:17 has no hits.
BS31708.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:01 Download gff for
BS31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14946-RC | 1481..2437 | 17..973 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:45 Download gff for
BS31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14946-RD | 280..1236 | 17..973 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:05 Download gff for
BS31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14946-RD | 280..1236 | 17..973 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:05 Download gff for
BS31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12063607..12063870 | 710..973 | 100 | <- | Minus |
| 2L | 12063929..12064289 | 349..709 | 100 | <- | Minus |
| 2L | 12064350..12064504 | 194..348 | 100 | <- | Minus |
| 2L | 12064566..12064719 | 40..193 | 100 | <- | Minus |
| 2L | 12065270..12065292 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:45 Download gff for
BS31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12063607..12063870 | 710..973 | 100 | <- | Minus |
| arm_2L | 12063929..12064289 | 349..709 | 100 | <- | Minus |
| arm_2L | 12064350..12064504 | 194..348 | 100 | <- | Minus |
| arm_2L | 12064566..12064719 | 40..193 | 100 | <- | Minus |
| arm_2L | 12065270..12065292 | 17..39 | 100 | | Minus |
BS31708.pep Sequence
Translation from 16 to 972
> BS31708.pep
MIEREIIHTTPASKRIFDVLKDVLQFFELYVRILLELFVSLVQIVLPKKQ
KDVSGEIVLITGTGHGIGRELALHYASLGSTVVCVDIDGKNNLQTVEKAK
RLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTHPIL
QQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGIS
NLVPYCATKFAVRGLMEALHAELRQGPFRDLIRTTTIFPYMTNTGLCKHP
KVKFPSILGLLDPKQVAKRIVEAHRTDLMEVTIPSCLLYINNWTRLLPDH
CGLMLKDFIDSGVESDLI*
BS31708.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14946-PE | 318 | CG14946-PE | 1..318 | 1..318 | 1638 | 100 | Plus |
| CG14946-PC | 318 | CG14946-PC | 1..318 | 1..318 | 1638 | 100 | Plus |
| CG14946-PD | 318 | CG14946-PD | 1..318 | 1..318 | 1638 | 100 | Plus |
| CG2254-PA | 320 | CG2254-PA | 16..318 | 13..316 | 684 | 44.1 | Plus |
| CG15629-PA | 325 | CG15629-PA | 7..312 | 6..315 | 419 | 32.3 | Plus |
