BS31723.complete Sequence
926 bp assembled on 2012-08-30
GenBank Submission: KX806062
> BS31723.complete
GAAGTTATCAGTCGACATGCTAGACGGTTGGTACTGCAGATCCCTGGCCA
ACCAGGAGGATGGCGCCATAAAGGACGAGCCGCCGAGCGACGACGAGCCC
GCACAGCCCGCCAGAGATCGCGTCCCGCCAATTTCCCGCGGAGCAGCGCC
CGCTAGCTCATCCTCCGTATCCGCGGGCCTGGGCGCAGGCGAGACTGACT
TCAAGGAGCGCTACAAGAACCTCAAGAAGAAGCTGAAGTTCCTCATCTAT
GAGAACGAGTACTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCT
GAAAGTTTCCCGGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACG
AGAAGCCGGCCAAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGAT
TCGGAGCCAGCTTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAA
GGACGCCATTCGGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAG
GTGTGCCTCCGCACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGA
AAAATCCTAACCGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGC
TGCGAAAAAACAACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGC
AACTACAGACTGCTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAG
ATTGCCCGCCAGCTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAG
TCCGGAATGCACTTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAA
GCCCCTCTAAGTGTTATCCCAATGAAAGCCTGCAGCATCTGATGGAGGAC
GACTCTCACTCGCACGAGGTGGCCGCCGAGGAGTGCGTGCCCATGGAGTA
CACAAGTTAAAAGCTTTCTAGACCAT
BS31723.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 894 | CG18004-PA | 1..894 | 17..910 | 4470 | 100 | Plus |
| CG18004-RB | 876 | CG18004-PB | 4..876 | 38..910 | 4365 | 100 | Plus |
| CG18004-RD | 876 | CG18004-PD | 1..876 | 17..910 | 4165 | 98 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 1044 | CG18004-RA | 83..976 | 17..910 | 4470 | 100 | Plus |
| CG18004-RB | 1168 | CG18004-RB | 228..1100 | 38..910 | 4365 | 100 | Plus |
| CG18004-RD | 1026 | CG18004-RD | 83..958 | 17..910 | 4165 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10885590..10886152 | 251..813 | 2815 | 100 | Plus |
| 2R | 25286936 | 2R | 10885299..10885533 | 17..251 | 1175 | 100 | Plus |
| 2R | 25286936 | 2R | 10886210..10886307 | 813..910 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:52:45 has no hits.
BS31723.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-30 10:45:58 Download gff for
BS31723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 66..957 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:31 Download gff for
BS31723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 83..974 | 17..908 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:52 Download gff for
BS31723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 83..974 | 17..908 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:52 Download gff for
BS31723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10885299..10885532 | 17..250 | 100 | -> | Plus |
| 2R | 10885590..10886152 | 251..813 | 100 | -> | Plus |
| 2R | 10886211..10886305 | 814..908 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:31 Download gff for
BS31723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6772804..6773037 | 17..250 | 100 | -> | Plus |
| arm_2R | 6773095..6773657 | 251..813 | 100 | -> | Plus |
| arm_2R | 6773716..6773810 | 814..908 | 100 | | Plus |
BS31723.pep Sequence
Translation from 16 to 909
> BS31723.pep
MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSS
VSAGLGAGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRD
RTFLLDRLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRR
KHKDKGAPGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQL
TATVSPSQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTS
ATVPTTMLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*
BS31723.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-PA | 297 | CG18004-PA | 1..297 | 1..297 | 1542 | 100 | Plus |
| CG18004-PB | 291 | CG18004-PB | 2..291 | 8..297 | 1494 | 100 | Plus |
| CG18004-PD | 291 | CG18004-PD | 1..291 | 1..297 | 1491 | 98 | Plus |
