Clone BS31725 Report

Search the DGRC for BS31725

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:317
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG34424-RA
Protein status:BS31725.pep: gold
Sequenced Size:695

Clone Sequence Records

BS31725.complete Sequence

695 bp assembled on 2012-08-22

GenBank Submission: KX806524

> BS31725.complete
GAAGTTATCAGTCGACATGGAAACAGTTCGCACCGGTTCGCTCGAGTGTG
CAGTAGATGATCCAGCGGCAGGAATGGCGGCCACGATCCAGAACACCCTG
AAGGTGGCGCTGCGAAAGCGCATGAAGGATGCACTGAAGGGCATCGACGC
GGAGGCCATCGCCCGGCAGTCGCAGGCCGTCACGGCTAAGGTGCTGCAAA
GCGAGATCTTCCGGCAGGCGCAGCGGGTGAGCATTTACCTGAGCACAGCC
TCGGAGCTGGACACCACGGCGCTGCTGTCGGAGATGTTCCGCCTGGAGAA
GATGGTCTTTGTGCCCACCTACGAGGGCAGCAGGATGAAGATGGTGCGGC
TGCGCGGCATGGAGGAGTACGAGAGCCTGCCTCTGACCAAGTGGAACATA
AAGCAGCCGGACTTCAAGGAGGCACGCGAGGATGCCATGACCAACGGGCA
CGGCATCGATCTCTTCATTGTGCCCGGTGTGGCCTTCACCCGCTGCGGAG
CTCGGATGGGCCATGGCATGGGCTACTACGACAAGTTCCTCAAGCAGCAC
GCGGAGAAGTATCCGCACAAGAAGATCTCGCTGATGGCACTGTCGCTCAA
CGAGCAGATAGTCAGCAACGAGGAGTTGCCCATGGAGTCGCACGACGTCC
GTTTGCACAGTGTAATTACGGAAAACTAAAAGCTTTCTAGACCAT

BS31725.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34424-RA 606 CG34424-PA 1..606 74..679 3030 100 Plus
CG34424-RB 606 CG34424-PB 1..606 74..679 3030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34424-RA 915 CG34424-RA 209..871 17..679 3315 100 Plus
CG34424-RB 699 CG34424-RB 1..655 25..679 3275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23359668..23359926 189..447 1295 100 Plus
2R 25286936 2R 23359989..23360222 446..679 1170 100 Plus
2R 25286936 2R 23359423..23359598 17..192 880 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:38:06 has no hits.

BS31725.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:06 Download gff for BS31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG34424-RA 205..859 17..671 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:01 Download gff for BS31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG34424-RA 209..863 17..671 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:29 Download gff for BS31725.complete
Subject Subject Range Query Range Percent Splice Strand
CG34424-RA 209..863 17..671 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:29 Download gff for BS31725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23359423..23359596 17..190 100 -> Plus
2R 23359670..23359925 191..446 100 -> Plus
2R 23359990..23360214 447..671 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:01 Download gff for BS31725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19246946..19247119 17..190 100 -> Plus
arm_2R 19247193..19247448 191..446 100 -> Plus
arm_2R 19247513..19247737 447..671 100   Plus

BS31725.pep Sequence

Translation from 16 to 678

> BS31725.pep
METVRTGSLECAVDDPAAGMAATIQNTLKVALRKRMKDALKGIDAEAIAR
QSQAVTAKVLQSEIFRQAQRVSIYLSTASELDTTALLSEMFRLEKMVFVP
TYEGSRMKMVRLRGMEEYESLPLTKWNIKQPDFKEAREDAMTNGHGIDLF
IVPGVAFTRCGARMGHGMGYYDKFLKQHAEKYPHKKISLMALSLNEQIVS
NEELPMESHDVRLHSVITEN*

BS31725.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34424-PA 201 CG34424-PA 1..201 20..220 1015 100 Plus
CG34424-PB 201 CG34424-PB 1..201 20..220 1015 100 Plus