BS31729.complete Sequence
617 bp assembled on 2012-08-22
GenBank Submission: KX800933
> BS31729.complete
GAAGTTATCAGTCGACATGAGCGCTACCTGGGTAACGATTCTCAGCATCT
CGACTTGTGTGGTTCTGCTGAAGCTCAGTGAGATCAGGAGCAAGGAGAGC
TGTTATTATGTGACCTTCACGTATGCCAATTGGACGGATGACCGACCTCG
GTTTGTTGTGAACATGACCTTCTCGAATCAGACTGGCATCGGCTCAGTAA
CCACCATTAACGAGGAGATTGCCTCACCGGTGTCTCGCATCCTCATACTT
CAGCACTCCGGTCGGGGTAAGCCTCGCACCATATACAACGCCTCCACCAA
ACTGTGCGACCTGCAGAATGTCTTCAATTCCGTACCGCTTTTTAAGCCAG
CCAAGGACAACATGCTCAAGCAAAGTAACTACACGCTGAGCTGTCCTCTG
GTCAAAGGCACATACGTCATGATCAACATGCGCGTAAGCCCCAAAAACCC
ACTTCTGAGCCTTCTCTACCAACCGAAACAAACGTTCTCCGTGAGTGGCG
GCTTGTTTGAAGAACTTTCACGTGGCCGCAGACTAAGGGCGCTGTCCACC
TACTTCATGACTGGAAAGGTTGTGAAAAAGTACTGTGGATCCAATGAATA
AAAGCTTTCTAGACCAT
BS31729.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-RB | 585 | CG31976-PB | 1..585 | 17..601 | 2925 | 100 | Plus |
| CG31976-RC | 585 | CG31976-PC | 1..585 | 17..601 | 2925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-RB | 2206 | CG31976-RB | 1388..1974 | 16..602 | 2935 | 100 | Plus |
| CG31976-RC | 1014 | CG31976-RC | 196..782 | 16..602 | 2935 | 100 | Plus |
| CG31975-RC | 2206 | CG31975-RC | 1388..1974 | 16..602 | 2935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 138694..139200 | 602..96 | 2535 | 100 | Minus |
| 2L | 23513712 | 2L | 139256..139337 | 97..16 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:38:25 has no hits.
BS31729.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:08 Download gff for
BS31729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RC | 1389..1971 | 17..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:08 Download gff for
BS31729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31976-RB | 1389..1971 | 17..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:36 Download gff for
BS31729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RC | 1389..1971 | 17..599 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:36 Download gff for
BS31729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 138697..139198 | 98..599 | 100 | <- | Minus |
| 2L | 139256..139336 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:08 Download gff for
BS31729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 138697..139198 | 98..599 | 100 | <- | Minus |
| arm_2L | 139256..139336 | 17..97 | 100 | | Minus |
BS31729.pep Sequence
Translation from 16 to 600
> BS31729.pep
MSATWVTILSISTCVVLLKLSEIRSKESCYYVTFTYANWTDDRPRFVVNM
TFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQ
NVFNSVPLFKPAKDNMLKQSNYTLSCPLVKGTYVMINMRVSPKNPLLSLL
YQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNE*
BS31729.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-PB | 194 | CG31976-PB | 1..194 | 1..194 | 1001 | 100 | Plus |
| CG31976-PC | 194 | CG31976-PC | 1..194 | 1..194 | 1001 | 100 | Plus |
| CG12662-PA | 171 | CG12662-PA | 11..171 | 42..190 | 195 | 27.3 | Plus |
