BS31749.complete Sequence
3635 bp assembled on 2012-09-26
GenBank Submission: KX806098
> BS31749.complete
GAAGTTATCAGTCGACATGAACACCGCGGGAGCCACCAGTCAACCGCCGC
CCACTAAAAATGAGATTAACTCCGAGGAGTATCTCATCCACGTGCATATG
CCGAACAAGAGCTTCAAGGCTGTTCGGTTTAATGTCAAGGAGACCGTTTT
CCATGTGATCCGGCGCACTGTCGAGGATCTGGGCACGGATGGACGGACGC
CCAGCATTCAGCGATATGCCTGCCGCATGCTTAACATGATCACCAAGGAG
GTGATTTGGCTGGCTAGAAGCACTTCAATGCAGAAGGTTCTCTCGCACAT
CCTGACGCCCGGCTGCTCCAACGTTGACTGTCCCAACAACCAGTCGGAGT
TGGATGAGGTTCTATTGGAGCACGGAAGAAGGATCACCGATAATAGGGTG
TGGCGAGTGGAGCTCAGAGTGCGCTACGTGCCAAATAATATTCAAGAGCT
CTTCGAGGAGGACAAGGCCACATGCTTCTATTATTTCAATCAGGTGAAAG
AGGACTTTATCCAAGCCAATGTCACAGCCATCGACACTGAAGTGGCGGTG
CAACTGTGCTGTCTGGGCATTCGTCATTATTTCAAGAACATCACCGTGAA
AGCACCTGACAAAAAGCAGCACATTGACTACATTGAAAAGGAAATCGGAT
TTAAAAGTTTTCTTCCACAATCTGTGATAGCCACATCAAAGCCAAAGAAT
CTTAAGAAACTGATCCAAGTCGGTTACAAAAAGGTCTACAATTACAACGA
CATTGAGTACTTGACGCGGTTCTTTGATCTTCTGAAGAATATTTATTTAA
CGAACTTCGAGCAGTTCTCGGTAACCCTGAGCTCGGCGTGGAATATTTCT
GGAATTCTACACGTCGGCCCTCACATTGGAATCTCGTACCAGACTCATCC
TCAGGCCAGCTTGAAGAACGTGGCTCAGTTTAAAGATGTGGTCTCTATTA
AAACGTGCACTTTACCAAAGGAAAAACTGTCCAAGTCTGGGGAGAATACC
ACAGAACCAGAGCTTCAGAATTTTAATTGCAACTGCCAGAAGATTAAAAC
CCAAATAAAAATATCCGCTTCCAACAATGTGGAAGATTTGGTTATAACGT
GCAATGGTATTAATACCGCTGAGAGTATTGCTGACCTAATTGACGGTTAC
TGCCGGCTGTTATCAAAAGACCTAGAGTTCACGATTTGGCATCGAGAGAC
AAACGCGTCGAACGAAGATAGCGCAAAAGCATTGCCCAATGATGCGACGC
TGGGGTCCAATAAATCAACTTCAAGTCAGGGAAAACCGATGCTGACCGAT
GATTATGCCGAGATTGGTTTATTGGAGGGCGAGGGCGACTACTCTACGCC
CACCGTTCGAAATTATGAGTTGGACAGAGCCCTCATAACGCCGAGCGCCA
AAATTGGTGTGGGACAGTTTGGTGATGTGTATGTAGGCACGTATACGCTT
CCGAAACTGGGCAAGGGCAAGAACTTAGCAGGAAATGGAAAAAATAGTAA
TAGTGACCAAAGAAATGCCGATTCAAGGCCAGATGTTATACAAGTGGCGA
TAAAGACATGTAAAGCTAACGACGATCCTGAAAAAACCGAAAATTTTCTT
GCCGAAGCTTATATTATGCAAAAATTCGATCATCCCCATATTATACGCTT
AATCGGCATTTGCAGCGTAATGCCCATTTGGATAGTTATGGAATTGGCCA
AACTGGGTGAATTGCGTGCGTACTTAAAGACAAACAGCGAAAGATTAAGC
CACGGTACTTTACTGAAGTATTGCTATCAGCTATCGACTGCTCTTAGTTA
TTTGGAATCCAAAAAGTTTGTTCACCGAGATATAGCGGCGCGTAATGTAC
TAGTCAGCTCACCAACGTGTGTTAAGTTGGCTGATTTTGGATTATCACGT
TGGGTTTCCGATCAGTCGTATTATCACTCAACACCCACAGTTGCCCTACC
CATTAAATGGATGTCCCCCGAGTCAATAAACTTTAGAAGATTTACCACTG
CTAGTGATGTTTGGATGTTTGGTGTCTGCATTTGGGAAATACTCATGCTC
GGTGTAAAGCCTTTCCAAGGCGTCAAGAACAGCGATGTTATATTGAAGCT
CGAAAACGGAGAGCGTCTGCCATTGCCTCCCAACTGCCCACCTAGGTTAT
ATTCGTTAATGTCCCAATGCTGGGCGTACGAGCCACTTAAACGACCGAAT
TTCAAGCGGATCAAGGAAACTCTGCATGAAATTCTGATTGAAGACAGCAT
TAATTCATCGGAGACACTGAAGCGGGAGCAACGAAAAGTGGCTTCCATGT
CCTGGATTGGCAGTGATGACATCGACATTCCGCCATCGAAACCTTCAAGG
GTGATGCACGATCCTGACATCACTGGCTTAATGCCTGAAACAACGGGGCT
ACCTCAGACCTATATTATTGCACAAAATCCCGCGGTGCTGGCCAAACTGA
TGATGGAGAACCAAAAACGAGGCATAAATCCAGCGGCGTACACCACACCA
GCTTCGGGCATTCACAATGTTTTGGGCGAAAAACTACGACAACAGCAAAA
GGATAGCAACAGCGACAGCGAATGGTTAATTCAAGAAGAATTGCTACGGC
AGAGATCCTGCTCAATACCTCAAGGATCGCTCAATGATCATCAGGCTCAA
ATGTTTAAGCTTGACTTCATGTCAGCTGGTCCTTCCAGTTTGCCGGACTG
CTCGAACTCCAGTTCTCGACCTATGACACCAAATGCCAATCTTTCTTCAC
TGAAGTCGAACCACTCATCGGCGGATCATTTGTCCAGCTTGACATCTGCA
GAAGAACAGATGGGTTCAAATGCACGAAACCTGGGCAGTGCAGTTCCAAG
TCGACCACCTAACCGCGCAGATGACGAAGTTTATTGCGCCACCACACTGG
TGGTCAAATCAATAATGGCGCTGTCACAAGGTGTGGAGAAAGCGAATACC
GAGGGTTACTTGGAATTGGTTAAGAACGTGGGCGTCAAGTTGAGAAACTT
GCTAACATCGGTGGACAAAATATCTATAATATTTCCAGCACAGGCCCTCA
AGGAAGTGCAAATGGCACATCAGGTACTTTCAAAAGACATGCACGAATTG
GTCTCAGCGATGCGATTGGCTCAACAATATAGTGACACAACGCTGGATTG
TGAATATCGCAAGAGTATGCTGTCTGCTGCCCACGTTTTGGCTATGGACG
CCAAAAACCTGTTTGATGTTGTCGATTCGATACGTCAACGTTATCAGCAT
CTATTCCCGCCATCCGCCACAAAAGAAACAAGTTGTTCGTCAAGTTTCGA
GTCGACTTCTGGATCTATTGTCGCAGAGCCAGTTAATGACCTTGGTGGTT
ATATCAAGACTAGCACTTCTGGAGATTTGCTTCAAAACACAGGAATATAT
GATAATGATTTGCATCATAGCTTCAACTCGCAATTGCAGTTGCAAAACCC
AAAAGCCAGCATCGACTTAAGCGGCGGTGGTAGTCTACAGCGAGGGATGA
GCCTTGGCTTGGACACAACCAGGTCGACAAACGAACCGTTGCGAATTGTT
GAGGAGACCCTGGGCAGCCCGGGTGAACATATGTACTGCAATACGTCCGC
CTTGCACGGCCACGCGTAAAAGCTTTCTAGACCAT
BS31749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:13:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fak-RG | 3603 | CG10023-PG | 1..3603 | 17..3619 | 18015 | 100 | Plus |
| Fak-RA | 3603 | CG10023-PA | 1..3603 | 17..3619 | 18015 | 100 | Plus |
| Fak-RC | 3603 | CG10023-PC | 1..3603 | 17..3619 | 18015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fak-RG | 4142 | CG10023-RG | 92..3695 | 16..3619 | 18020 | 100 | Plus |
| Fak-RA | 4713 | CG10023-RA | 663..4266 | 16..3619 | 18020 | 100 | Plus |
| Fak-RC | 4240 | CG10023-RC | 190..3793 | 16..3619 | 18020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:13:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19435775..19436479 | 770..66 | 3525 | 100 | Minus |
| 2R | 25286936 | 2R | 19434755..19435250 | 1610..1115 | 2480 | 100 | Minus |
| 2R | 25286936 | 2R | 19431106..19431562 | 3619..3163 | 2285 | 100 | Minus |
| 2R | 25286936 | 2R | 19431787..19432246 | 3056..2597 | 2285 | 99.8 | Minus |
| 2R | 25286936 | 2R | 19435314..19435550 | 1114..878 | 1185 | 100 | Minus |
| 2R | 25286936 | 2R | 19433904..19434109 | 2226..2021 | 1030 | 100 | Minus |
| 2R | 25286936 | 2R | 19434162..19434310 | 2023..1875 | 745 | 100 | Minus |
| 2R | 25286936 | 2R | 19433501..19433642 | 2507..2366 | 710 | 100 | Minus |
| 2R | 25286936 | 2R | 19433703..19433842 | 2366..2227 | 700 | 100 | Minus |
| 2R | 25286936 | 2R | 19434370..19434504 | 1876..1742 | 675 | 100 | Minus |
| 2R | 25286936 | 2R | 19434560..19434692 | 1743..1611 | 665 | 100 | Minus |
| 2R | 25286936 | 2R | 19431626..19431737 | 3163..3052 | 560 | 100 | Minus |
| 2R | 25286936 | 2R | 19435607..19435718 | 879..768 | 560 | 100 | Minus |
| 2R | 25286936 | 2R | 19432303..19432393 | 2596..2506 | 455 | 100 | Minus |
| 2R | 25286936 | 2R | 19436548..19436597 | 65..16 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:13:32 has no hits.
BS31749.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-26 11:03:30 Download gff for
BS31749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fak56D-RA | 660..4260 | 17..3617 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:32 Download gff for
BS31749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fak-RC | 191..3791 | 17..3617 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:59:55 Download gff for
BS31749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fak-RC | 191..3791 | 17..3617 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:59:55 Download gff for
BS31749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19431108..19431562 | 3163..3617 | 100 | <- | Minus |
| 2R | 19431627..19431737 | 3052..3162 | 100 | <- | Minus |
| 2R | 19431792..19432246 | 2597..3051 | 100 | <- | Minus |
| 2R | 19432303..19432392 | 2507..2596 | 100 | <- | Minus |
| 2R | 19433502..19433641 | 2367..2506 | 100 | <- | Minus |
| 2R | 19433703..19433842 | 2227..2366 | 100 | <- | Minus |
| 2R | 19433904..19434108 | 2022..2226 | 100 | <- | Minus |
| 2R | 19434164..19434308 | 1877..2021 | 100 | <- | Minus |
| 2R | 19434370..19434502 | 1744..1876 | 100 | <- | Minus |
| 2R | 19434560..19434692 | 1611..1743 | 100 | <- | Minus |
| 2R | 19434755..19435250 | 1115..1610 | 100 | <- | Minus |
| 2R | 19435314..19435549 | 879..1114 | 100 | <- | Minus |
| 2R | 19435608..19435717 | 769..878 | 100 | <- | Minus |
| 2R | 19435777..19436479 | 66..768 | 100 | <- | Minus |
| 2R | 19436548..19436596 | 17..65 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:32 Download gff for
BS31749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15318613..15319067 | 3163..3617 | 100 | <- | Minus |
| arm_2R | 15319132..15319242 | 3052..3162 | 100 | <- | Minus |
| arm_2R | 15322819..15323054 | 879..1114 | 100 | <- | Minus |
| arm_2R | 15323113..15323222 | 769..878 | 100 | <- | Minus |
| arm_2R | 15319297..15319751 | 2597..3051 | 100 | <- | Minus |
| arm_2R | 15319808..15319897 | 2507..2596 | 100 | <- | Minus |
| arm_2R | 15321007..15321146 | 2367..2506 | 100 | <- | Minus |
| arm_2R | 15321208..15321347 | 2227..2366 | 100 | <- | Minus |
| arm_2R | 15321409..15321613 | 2022..2226 | 100 | <- | Minus |
| arm_2R | 15321669..15321813 | 1877..2021 | 100 | <- | Minus |
| arm_2R | 15321875..15322007 | 1744..1876 | 100 | <- | Minus |
| arm_2R | 15322065..15322197 | 1611..1743 | 100 | <- | Minus |
| arm_2R | 15322260..15322755 | 1115..1610 | 100 | <- | Minus |
| arm_2R | 15323282..15323984 | 66..768 | 100 | <- | Minus |
| arm_2R | 15324053..15324101 | 17..65 | 100 | | Minus |
BS31749.pep Sequence
Translation from 16 to 3618
> BS31749.pep
MNTAGATSQPPPTKNEINSEEYLIHVHMPNKSFKAVRFNVKETVFHVIRR
TVEDLGTDGRTPSIQRYACRMLNMITKEVIWLARSTSMQKVLSHILTPGC
SNVDCPNNQSELDEVLLEHGRRITDNRVWRVELRVRYVPNNIQELFEEDK
ATCFYYFNQVKEDFIQANVTAIDTEVAVQLCCLGIRHYFKNITVKAPDKK
QHIDYIEKEIGFKSFLPQSVIATSKPKNLKKLIQVGYKKVYNYNDIEYLT
RFFDLLKNIYLTNFEQFSVTLSSAWNISGILHVGPHIGISYQTHPQASLK
NVAQFKDVVSIKTCTLPKEKLSKSGENTTEPELQNFNCNCQKIKTQIKIS
ASNNVEDLVITCNGINTAESIADLIDGYCRLLSKDLEFTIWHRETNASNE
DSAKALPNDATLGSNKSTSSQGKPMLTDDYAEIGLLEGEGDYSTPTVRNY
ELDRALITPSAKIGVGQFGDVYVGTYTLPKLGKGKNLAGNGKNSNSDQRN
ADSRPDVIQVAIKTCKANDDPEKTENFLAEAYIMQKFDHPHIIRLIGICS
VMPIWIVMELAKLGELRAYLKTNSERLSHGTLLKYCYQLSTALSYLESKK
FVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTVALPIKWMS
PESINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGER
LPLPPNCPPRLYSLMSQCWAYEPLKRPNFKRIKETLHEILIEDSINSSET
LKREQRKVASMSWIGSDDIDIPPSKPSRVMHDPDITGLMPETTGLPQTYI
IAQNPAVLAKLMMENQKRGINPAAYTTPASGIHNVLGEKLRQQQKDSNSD
SEWLIQEELLRQRSCSIPQGSLNDHQAQMFKLDFMSAGPSSLPDCSNSSS
RPMTPNANLSSLKSNHSSADHLSSLTSAEEQMGSNARNLGSAVPSRPPNR
ADDEVYCATTLVVKSIMALSQGVEKANTEGYLELVKNVGVKLRNLLTSVD
KISIIFPAQALKEVQMAHQVLSKDMHELVSAMRLAQQYSDTTLDCEYRKS
MLSAAHVLAMDAKNLFDVVDSIRQRYQHLFPPSATKETSCSSSFESTSGS
IVAEPVNDLGGYIKTSTSGDLLQNTGIYDNDLHHSFNSQLQLQNPKASID
LSGGGSLQRGMSLGLDTTRSTNEPLRIVEETLGSPGEHMYCNTSALHGHA
*
BS31749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fak-PG | 1200 | CG10023-PG | 1..1200 | 1..1200 | 6241 | 100 | Plus |
| Fak-PA | 1200 | CG10023-PA | 1..1200 | 1..1200 | 6241 | 100 | Plus |
| Fak-PC | 1200 | CG10023-PC | 1..1200 | 1..1200 | 6241 | 100 | Plus |
| Fak-PB | 1200 | CG10023-PB | 1..1200 | 1..1200 | 6241 | 100 | Plus |
| Fak-PF | 1198 | CG10023-PF | 1..1198 | 1..1200 | 6218 | 99.8 | Plus |
