BS31759.complete Sequence
3779 bp assembled on 2012-10-15
GenBank Submission: KX805317
> BS31759.complete
GAAGTTATCAGTCGACATGGATCGGGATTCGAGCATGCAGGCGAAAAACC
TAGATGCTCAATGCAACCCAGACCTCAAAATGGCGTCTGCAAATTCAGAA
ACTTTAGCGTCGGCAACGCACGAGCTGAAAATTATGGACGTAGAGGGTGG
TGCTCTGGTGGATCCGGATCACATCGAGGAAGTGGAGACCTCCATGGTCA
TCGTGGTGGATGATGACGATGGGGATGTGGCCATGGTGGTGGAGGAGGAC
AAGCACCCGATGCGGGATGACCCGTGTATTGAGGACATCATGGATGACGA
ACATGCTCCATTGGTGGCCGAGCTACAGTCCGCTCTAAATAACCCAGACG
ACAAACAGGCCAGCGAGGATCCCCTCCTGGAAGACCAGGAACGTGAACCC
GATGCCATGTCCACTAAAACTGAACCCTCCAGCGATGCGGAGAGCTCCCA
TTCGTACCACGATCCCATGGGCCTGCTGGAGAGGATTGAAATCCATGATC
CGGGAGACAGCCAGGATGACGACGACGAGGATGACGAAAGCAGCAATGGC
GGTGGCGTTGACGGAGGCATGCGCCGCAAGATGCCCCGCGCACAGCGCTG
GCTCCTCTGGATGAAGCGTTGGCCCTGGATCCTACACGAGGACTCCGATG
GCACCTTAGCGTTCTGCCTTTACTGCAACATATCCATTAACGTGAACAAC
CGCTCTAGACACATCCAACAGCACAACGTGTCGCTCTCCCACCAGGAACG
CGAGTGCAACTATCTGGCATTCAAGAAAAGTGAGGAGGAAACTCGAGGAG
CCGACAACGAAATCAAGCACGAATTCGGCACCAAGAGCTATGTGGCCGCC
ATGAAGCAAAAACGAATCTCCGAGACCGAGGCATTTAACAACTTCAACTG
GCTGCGTTGGCTCCGTTGGCATCCTTGGCTTGAACGTTCCATGCCCACAG
GGACCATCGGGACATGTCGCATCTGCAGCGTGCGAATGAACGTGGAGTTT
GTCTATTTGCGCAAGCGCCACGAAACCACCAAAGGTCACATGGAGGCACT
GCGCAACCTAGATTCCGATAAGCGGAGTCGGAAGCGAAAGAGGAGCAAGA
GCAACAGCGTGACCAATAGCGGCGGGGATGAGGCCGAGCGAGAGAAGGAA
TCTGAACCAGAAGTTGGGCCGGAGGATGCTCAGGACACCCCTGTGGTTAT
GATGAACGGCGATGTGGACTCAGGCGACGACCCTGGCAAGTGGTGTGCAC
TGATTCCGGACACCAATCCACAGCAATGCCGATGTACGCTCTGCAACTGC
ACAATGGCGATTACCAGCTTCCTACGGCACTGTAAAACCAGAGCTCATTG
TCACATGCTATCGACACCCGCTGAAAAGGGCTCTTCAGATATTCGCGGCA
TTTGGGCCGTGTTCGCCGACATGCATCCTTGGTTGATTGCTGATCCCGAA
GACCCCAGCATTGGGTACTGCAGCGTCTGTCGCAAGCGATTCATGTATGG
AAACTCAGAGATCAAGCGCAAGAATCACGAAAAATCCGAGAAGCATACCT
TGGCTTTGGCCAGCGCCAAGGCAGGCATCGAAGTTGGTTCGGCTGACGGC
AGAGGCGGCGATAACATGGATGAAGAGGAAGCGGCGGCAAGTGATCAAGC
CCAGTCATCGCAGACCGATGACAGCGAAGATAATGACGATGACAATTGGT
CCGAGATCCAAAAACTCGGAAAAGGTTTTGCTCATAAGTCCTCTAGCGAG
CCAAGAAAGGCCACGGTTCGCGCTGGGGTACGTTTTTACCCGTGGCTTTG
CTACTCCAAGGACCGAAAGACTCAGATTTGCAAATTCTGCCGCGTGCGCT
TTCACAACGAAGCGGCAAAGGCGCGGCATGAGTTGAGTGCCCGGCATGTA
AAGCTGGTAAAGCAGTTCAAAATGCGGCAAGCGAAACTGCACCAGGGCAC
AAACACGCAAACTAAACATAATGCGCAGGATGATGAAGAATCACAGGAAC
AGGACGAGGAATATGGAGAAGAAGAGGAGGACGCAGAAGAAGATTCCCAA
AGCAACTTCGACTTGGGCACCGTGCAGGCAAGAAAGACTGCTCGAGCGGA
CAATAAGCTTTTTGTCAAGCCCATTCCGGCAACCATGAAGGGCAAGGTTA
TGGTGTGGAAGGGCCGCTTCCCGTGGCTCTCCTACAAAAAGAACGAGCAG
CGTGGAAACTATGCTTGGTGCAAGCTGTGCGAAGTGTCTCTCTACCTGCC
CTCATCCAAGTGGGCCTCCAAGCACCAGAGGACTTCCCGACACATACGCC
TCCGCATTGATCGAAAGCGCAATGGTGGCAACCCTTTGAAAACATCGAAC
AAAAACTCAGGTGAAATATCCACTGTTGTGGCCACAGCTTCGGCTTTGGC
CAGCGCCGAGGCTAGACAGAAAGCGGCTATGGCAGAGCTGCAAGCGAAGT
ACGACTGGCTGGATCCTGATGCCAATGACGAGAATCACTGTCACTGCCGT
GTTTGTGATAGCCGGCTGCCGATCAAGGTATTTTACCTGCGGCAACACGA
CGCTTCGCGTAAGCACGTCGAAAATAAGGAGCGGCAAAGGGCCAATGCCG
CCGCTGCCGCCAATGCACCATCAGTTAGTCCCACTTCCACCGTTGATGCG
GAAAGGCAGGAGTCTGGAATGGACAAGGAGAGCGAAAACGATATGAGCGT
TCGATCCGATGGCAGCACAGCGGAACCGCTGGCGAAGCGGTCCCGACGCT
CAATGGAGGTTCGTCGCATAATACGCGCCCTTCGCGACTCAATGGGCAAG
CGACAGGAAGAACGCTCCCAAATGGACATGGCCAGGGACATGATATGCTC
GTCGTTTGATATTGTTACACGCTTGCGAACTTTGGAACGGGAGTCGGTCG
CACATAACGAGTCTATGGCCCAGGCGCCGCCATCGGTGACAGTGTCACCG
ATTAAGCCACCGGAGCCACGACATGTAATGGATCTCTTCTTTGACAGCAT
TTCGCCGACCATGAAGTCCCTGCCGCCGGATTTAGCCGCAGAGGGCAAGT
CGAAAATCATGCAGCTCGTTTGTAGCTTGGAGCTTCGAGCCATGCAGAGA
AATGCGACAACTCCAACCCCAGCTACAGTTTCTGCTTCCTCGAAATGGCC
TTCTTCAACTACGGTGACCCCAGTTAAAACTCCTCCTGCTCCTATTTCAG
CTCCCCTTGCTTCTGTCGATGCAGATTTGCATTCCTCGGTTGTCACAACA
CCGCATGAATACAATAATGGGCAGAACAATAATAACGACAAGGAAACCGT
ACCGAAAGAGCCAGTTACCGGGGCTTCCTCTGCCCAAGTGACCATCAATG
GGAGCGCCAAAGACCTGCCAGAGAATATACGCCGTATCTTAACTTCCAAC
CAAACGCAAGTGACCAACCGCCTCGAGACGGATTCCGTGCGTTGTGTACC
TCTTGACAAACTAACAACACAGAGTCGGACCAACGTGAACGGACGACTCA
GTCAAGGTGGCACTTCGGAAGCACCATCCACCCCACAGGCGGACCTTAGC
AATGGTAACACGTTGGCCATGATCAGGCAGATACGGGTTAACAATAACAA
CAGTTCCAAGATCACCGTTACTAATACGCCTCAGATGCAACAGCCGCAGC
AGGCACAGGCAAGCATAACGTCCTCGACTCCAATAATGCGTGGTGGTCCC
AGCAGCAACGGTTGTCAAATCACAACATTTCGGACAATGGTGAACCATAA
CCGCAGGCCATAGAAGCTTTCTAGACCAT
BS31759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-RB | 3747 | CG8599-PB | 1..3747 | 17..3763 | 18735 | 100 | Plus |
| Su(var)3-7-RA | 3753 | CG8599-PA | 1..3753 | 17..3763 | 18640 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-RB | 4217 | CG8599-RB | 153..3900 | 17..3764 | 18740 | 100 | Plus |
| Su(var)3-7-RA | 5051 | CG8599-RA | 153..3906 | 17..3764 | 18645 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13267832..13268893 | 2703..3764 | 5310 | 100 | Plus |
| 3R | 32079331 | 3R | 13266787..13267765 | 1725..2703 | 4895 | 100 | Plus |
| 3R | 32079331 | 3R | 13264516..13265300 | 17..801 | 3925 | 100 | Plus |
| 3R | 32079331 | 3R | 13265741..13266319 | 802..1380 | 2895 | 100 | Plus |
| 3R | 32079331 | 3R | 13266387..13266732 | 1380..1725 | 1730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:51:39 has no hits.
BS31759.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-15 10:11:18 Download gff for
BS31759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RB | 162..3908 | 17..3763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:49 Download gff for
BS31759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RB | 153..3899 | 17..3763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:24 Download gff for
BS31759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RB | 153..3899 | 17..3763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:24 Download gff for
BS31759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13264516..13265300 | 17..801 | 100 | -> | Plus |
| 3R | 13265741..13266319 | 802..1380 | 100 | -> | Plus |
| 3R | 13266388..13266732 | 1381..1725 | 100 | -> | Plus |
| 3R | 13266788..13267765 | 1726..2703 | 100 | -> | Plus |
| 3R | 13267833..13268892 | 2704..3763 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:49 Download gff for
BS31759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9090238..9091022 | 17..801 | 100 | -> | Plus |
| arm_3R | 9091463..9092041 | 802..1380 | 100 | -> | Plus |
| arm_3R | 9092110..9092454 | 1381..1725 | 100 | -> | Plus |
| arm_3R | 9092510..9093487 | 1726..2703 | 100 | -> | Plus |
| arm_3R | 9093555..9094614 | 2704..3763 | 100 | | Plus |
BS31759.pep Sequence
Translation from 16 to 3762
> BS31759.pep
MDRDSSMQAKNLDAQCNPDLKMASANSETLASATHELKIMDVEGGALVDP
DHIEEVETSMVIVVDDDDGDVAMVVEEDKHPMRDDPCIEDIMDDEHAPLV
AELQSALNNPDDKQASEDPLLEDQEREPDAMSTKTEPSSDAESSHSYHDP
MGLLERIEIHDPGDSQDDDDEDDESSNGGGVDGGMRRKMPRAQRWLLWMK
RWPWILHEDSDGTLAFCLYCNISINVNNRSRHIQQHNVSLSHQERECNYL
AFKKSEEETRGADNEIKHEFGTKSYVAAMKQKRISETEAFNNFNWLRWLR
WHPWLERSMPTGTIGTCRICSVRMNVEFVYLRKRHETTKGHMEALRNLDS
DKRSRKRKRSKSNSVTNSGGDEAEREKESEPEVGPEDAQDTPVVMMNGDV
DSGDDPGKWCALIPDTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHMLST
PAEKGSSDIRGIWAVFADMHPWLIADPEDPSIGYCSVCRKRFMYGNSEIK
RKNHEKSEKHTLALASAKAGIEVGSADGRGGDNMDEEEAAASDQAQSSQT
DDSEDNDDDNWSEIQKLGKGFAHKSSSEPRKATVRAGVRFYPWLCYSKDR
KTQICKFCRVRFHNEAAKARHELSARHVKLVKQFKMRQAKLHQGTNTQTK
HNAQDDEESQEQDEEYGEEEEDAEEDSQSNFDLGTVQARKTARADNKLFV
KPIPATMKGKVMVWKGRFPWLSYKKNEQRGNYAWCKLCEVSLYLPSSKWA
SKHQRTSRHIRLRIDRKRNGGNPLKTSNKNSGEISTVVATASALASAEAR
QKAAMAELQAKYDWLDPDANDENHCHCRVCDSRLPIKVFYLRQHDASRKH
VENKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGS
TAEPLAKRSRRSMEVRRIIRALRDSMGKRQEERSQMDMARDMICSSFDIV
TRLRTLERESVAHNESMAQAPPSVTVSPIKPPEPRHVMDLFFDSISPTMK
SLPPDLAAEGKSKIMQLVCSLELRAMQRNATTPTPATVSASSKWPSSTTV
TPVKTPPAPISAPLASVDADLHSSVVTTPHEYNNGQNNNNDKETVPKEPV
TGASSAQVTINGSAKDLPENIRRILTSNQTQVTNRLETDSVRCVPLDKLT
TQSRTNVNGRLSQGGTSEAPSTPQADLSNGNTLAMIRQIRVNNNNSSKIT
VTNTPQMQQPQQAQASITSSTPIMRGGPSSNGCQITTFRTMVNHNRRP*
BS31759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:58:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-PB | 1248 | CG8599-PB | 1..1248 | 1..1248 | 6582 | 100 | Plus |
| Su(var)3-7-PA | 1250 | CG8599-PA | 1..1250 | 1..1248 | 6569 | 99.8 | Plus |
