BS31763.complete Sequence
3497 bp assembled on 2012-09-26
GenBank Submission: KX803949
> BS31763.complete
GAAGTTATCAGTCGACATGGCTCCAGGTGGACGACAGCTTTTGTGGATGG
CTTCCATCTGCTGGATTGCATCACTAATGAGTGGAGCTGATGCACAGCAT
CTGATCGCTTATATCTCGCAAAGAGGTCTTCATGGAGAGATCACTTTTCG
GCAAATGAATGCCACCACGGTGGAGATCAAGGCCAACCTGGAGGCCACTT
TGCAGTACCCCGACCAAGTATGGAGTTGGGGAGTACGTCGCTTCCCCGTG
GACTACTCCAATATTGACCCAGACGAACGCTGCGAACTGAGTCGTTTGGG
CTCCCAGGTCCTGTCCTTTGACGAGGACTTGGAGTACCTGGTACTGCCCG
GAAATGAGACCTCCAGCTGGGAGCGAAACATGCAGTTGATTGGGGATCGG
GGAATCTGGGGGAAGTCCCTGGTTCTGACAGAGGTCAACGCTAATGCACG
GATCTGTGCCACCATCACCACCATCCAGAGTTCCGTGGAGCACATGGCAG
AGGCTCGTTTTAATACTCCTGTCGCTGGATCTGTCCATTTCCGCTGGCTG
GCCCCGGCGGAGGGAGCTGTTGGAGATACTCTAATCTACTCGGATCTTTA
CCATATTAGGGCGCAACCAGCTGCTCTGGAGGAAGATAGAAGTCAAGCTG
GACCGTTCACCCAGCACCACTGGAAGATCTATGTGACGGACATTTTCAAA
CATGACCACCATCGCACGGAGGACAACTGCAACTTCCTGCAGCAAGTTTT
CGATCCCCAAGGAAGTGGAGCTGGCAAGGGAATAGGTGATCTGGACGCAC
GCCTAGGCAGGATTGGAGTGGCCAAGAATGCCCTTCGTTCGCCACAACGC
AGCGTTTTTAGGGATGCTCAGTTGGCCCTGCTGCCCTCGGATCTTACCAT
TCCCCATAGAACTCTTTACCTGGTTCTTTTTGACAACCAACATCCAGATT
CGTACCTCGCGTGCACCAAGATTCGCCATGTCCAACCTTTGACACATAAA
ACTTTCATCAACTCTGGTGGTGTCAAGGGAGAGGTTACCTTCATGCAGCG
CTCCAAGTTCGACCCAACTTTCCTCAATTTCACCTTGGGAGCACCGCTTT
CCCAGCATGTCAGTCGCAAGTTCGCCGAAGATGTGGCCGCCTTTCGGATT
CACAGTCTGCCGCCGGTGCCTTCGAGGATGGGTCACGAGGACTACTGCCT
GACCACTGGGGACATGCATAATCCCCGGGAGATAAACGAGAATATACCCC
CACCCGGTTATGGAACCCAGGAGCAGTATCCCGTGGGCGATCTCTCCGGG
AAGCTACAGGGTCGCAATAAAGGTTATTGGCATCAGTATGTCTTACCAGG
AACGAGCTCCGAGTTGAATGGCCTCTACTGGGACGTATTTCTGCCCCTTC
AAGGACGTTATAGCATTGCCCAAAGAAGTCTGGTCATATACACTTTCAAT
CGATCTAATGTCACAAATATTACGAAGATGATTTGGGGCTGTTCGAGCCT
AAGTCAATATCAACGAAATGGAATCTACCAGCAGAACATGGTTACTGCTC
AGGTCCTTTTCCGCTATCCTGTGGTGGGTCGAGTCATATTCCGGCAGACG
GCGGAGCAGCCTTGGCAGGATACTACCGTTTTATTTGAGTACCTCATCCA
GGCGGATGGATCCACGCAGAATACTACCCACGATCATCGTTGGGCAATCC
ACAGCAATGCACCTGGAAAGGACTTCTATGACTGGCAACAGAGATGCATT
TCCGCAGGACCTGTATATAATCCATTCCGAGTGGATTGGGGCAATCGCAG
TGTGGATGACTTCTGCCGACCCAGTTTAGCCTCCATGTGCAGAGTGGGTG
CTATGGATGCCAGATCGGGAACCCTAACCATCGCTGGAGGCAGAAGAGTT
GCCCAGAAAATAAGTAGGAAGATGTTTGTAGACGGCAATCTTCCGCTCTC
CGGAAGACATAGTATCCTGGGTAAGTCTCTTGTTATCTATGAGGATAGTG
GACCCAAAGCCAGAGGAGAGCGATTGGCTTGTTCGGCCGTGATTGGACAT
TTCCGGAGGAAAGTGGTGGCCAAGGAGTGGTACGCAAATGGAGATTCGTT
GACAGTCAGCGGTCGGGTGGAAATCACCCAGCAATCGGAGTATGATGTCA
GCAATGTGGAGGTGCAACTTAAGGGGCTTCAGGATAATACAGGATATTAC
ATCCATAGGACACCCGTGGAAGCCAACTTGGCGTTTCCCTGCGAGGCATC
CACTCTATATGGTCACTGGAATCCTTTCGACGTCAGTCCAAAGTCATCAC
CTCCTCCGAAAAGGGGAACCACAGATCAGTACGAGATGGGAGATCTAAGT
GGAAAGTTCGGAGGTCTTGAGGGAGTAACCCAGTTCGAGGATGCCTATAA
CGATACGAATCTTCCACTATTTGGATATAACAGTATCATTGGAAGATCTG
TGGTTATTCAGAAGAAGCAAAAGAATGCCCGATGGGCTTGCAGTACTCTT
GAGCGTGGCTACAGTCCCAGTGAGGCTAGGGAACTGCGAGCCATTGCCTC
GTTTCATCATCCCACTGGATACGCCTATGGTTACATTAAGATGACTCAGC
TCATCCACAACGATGGTAGCCAGTCGGAGACGGTAATAGAGGTTAAGCTA
CGGCATCCGGGCAAAAACGACCGGAACTCCACGAGAAACCACAATTGGCA
GATTTTCGTTAATCCCGTGGGCGTTGATGCAGCCGTAAAGCCCACAATTA
CGCGATGTGTGGCTGGAGGATATGTTTGGAATCCATACTATACCCAGCTG
GCGGATCCACTGAATTTGGATCTCTATGAACAGGAGTGCAGTCCGGATAA
TCCTTTGCGCTGCTACGTTGGCGATGTGGGCGCCCGTTTGGGCACAATAG
ATCTTGGAGGTGAACGCGTCGTCCTGACCGACTCCAACTTTCCTCTGGAA
GCTCCTGTGGGAGCCATTGGGCGTTCTATTGTGATTTTTGGACCAGATCA
CTCCCATGAGCGGTTTGCTTGTGCGAATATAGAACCCGATCATAATGTCA
TTAAATACATAAACCTACAGAAGCCACCTCGATTCGTAGTTGCCCAGTTT
CTGGATGAGTTACGATCGGTGATGGGCATTCCGGAATGGATGTTGGATGT
GGATGCGCGTAAGACCAAGGAACTCCACGGTGGAGCCTGCATCCAGATGA
TCATCCACTTCAAGGGGCCTCTGGCCCACAGATTGGAGTTGGATATGTCT
CGATTGATAGCCGCCGGAAGATTGGATGCCCCTAGTCTGTTCATTCCCGG
TTATGTAAACCAAAAGCGAAAGGCGACCATATCATATCGTACCTGTGGTG
TAAGGGATACCAATGAAAAACGCACCAAGAACTTCAAGGGTGGCTTTTAC
TCCTCAAGCTCAGCTCCAAACGAACCAAAGCCATTAGTATTAGCTTTTGT
AGTCATTGGCTTAGCCTTTAGGTTCCTCTAAAAGCTTTCTAGACCAT
BS31763.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31028-RC | 3465 | CG31028-PC | 1..3465 | 17..3481 | 17325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31028-RC | 3775 | CG31028-RC | 140..3605 | 16..3481 | 17330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30169770..30170684 | 999..85 | 4575 | 100 | Minus |
| 3R | 32079331 | 3R | 30168438..30169096 | 2209..1551 | 3295 | 100 | Minus |
| 3R | 32079331 | 3R | 30169152..30169706 | 1554..1000 | 2775 | 100 | Minus |
| 3R | 32079331 | 3R | 30167712..30168039 | 2815..2488 | 1625 | 99.7 | Minus |
| 3R | 32079331 | 3R | 30168097..30168381 | 2493..2209 | 1425 | 100 | Minus |
| 3R | 32079331 | 3R | 30166981..30167262 | 3372..3091 | 1410 | 100 | Minus |
| 3R | 32079331 | 3R | 30167326..30167517 | 3090..2899 | 960 | 100 | Minus |
| 3R | 32079331 | 3R | 30166801..30166910 | 3481..3372 | 550 | 100 | Minus |
| 3R | 32079331 | 3R | 30167568..30167652 | 2900..2816 | 425 | 100 | Minus |
| 3R | 32079331 | 3R | 30170994..30171068 | 90..16 | 360 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:14:44 has no hits.
BS31763.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-26 11:03:35 Download gff for
BS31763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31028-RC | 137..3599 | 17..3479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:42 Download gff for
BS31763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31028-RC | 141..3603 | 17..3479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:20 Download gff for
BS31763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31028-RC | 141..3603 | 17..3479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:20 Download gff for
BS31763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30166803..30166910 | 3372..3479 | 100 | <- | Minus |
| 3R | 30166982..30167262 | 3091..3371 | 100 | <- | Minus |
| 3R | 30167326..30167515 | 2901..3090 | 100 | <- | Minus |
| 3R | 30167568..30167652 | 2816..2900 | 100 | <- | Minus |
| 3R | 30167712..30168033 | 2494..2815 | 100 | <- | Minus |
| 3R | 30168097..30168380 | 2210..2493 | 100 | <- | Minus |
| 3R | 30168438..30169094 | 1553..2209 | 100 | <- | Minus |
| 3R | 30169154..30169706 | 1000..1552 | 100 | <- | Minus |
| 3R | 30169770..30170682 | 87..999 | 100 | <- | Minus |
| 3R | 30170998..30171067 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:42 Download gff for
BS31763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25992525..25992632 | 3372..3479 | 100 | <- | Minus |
| arm_3R | 25992704..25992984 | 3091..3371 | 100 | <- | Minus |
| arm_3R | 25993048..25993237 | 2901..3090 | 100 | <- | Minus |
| arm_3R | 25993290..25993374 | 2816..2900 | 100 | <- | Minus |
| arm_3R | 25993434..25993755 | 2494..2815 | 100 | <- | Minus |
| arm_3R | 25993819..25994102 | 2210..2493 | 100 | <- | Minus |
| arm_3R | 25994160..25994816 | 1553..2209 | 100 | <- | Minus |
| arm_3R | 25994876..25995428 | 1000..1552 | 100 | <- | Minus |
| arm_3R | 25995492..25996404 | 87..999 | 100 | <- | Minus |
| arm_3R | 25996720..25996789 | 17..86 | 100 | | Minus |
BS31763.pep Sequence
Translation from 16 to 3480
> BS31763.pep
MAPGGRQLLWMASICWIASLMSGADAQHLIAYISQRGLHGEITFRQMNAT
TVEIKANLEATLQYPDQVWSWGVRRFPVDYSNIDPDERCELSRLGSQVLS
FDEDLEYLVLPGNETSSWERNMQLIGDRGIWGKSLVLTEVNANARICATI
TTIQSSVEHMAEARFNTPVAGSVHFRWLAPAEGAVGDTLIYSDLYHIRAQ
PAALEEDRSQAGPFTQHHWKIYVTDIFKHDHHRTEDNCNFLQQVFDPQGS
GAGKGIGDLDARLGRIGVAKNALRSPQRSVFRDAQLALLPSDLTIPHRTL
YLVLFDNQHPDSYLACTKIRHVQPLTHKTFINSGGVKGEVTFMQRSKFDP
TFLNFTLGAPLSQHVSRKFAEDVAAFRIHSLPPVPSRMGHEDYCLTTGDM
HNPREINENIPPPGYGTQEQYPVGDLSGKLQGRNKGYWHQYVLPGTSSEL
NGLYWDVFLPLQGRYSIAQRSLVIYTFNRSNVTNITKMIWGCSSLSQYQR
NGIYQQNMVTAQVLFRYPVVGRVIFRQTAEQPWQDTTVLFEYLIQADGST
QNTTHDHRWAIHSNAPGKDFYDWQQRCISAGPVYNPFRVDWGNRSVDDFC
RPSLASMCRVGAMDARSGTLTIAGGRRVAQKISRKMFVDGNLPLSGRHSI
LGKSLVIYEDSGPKARGERLACSAVIGHFRRKVVAKEWYANGDSLTVSGR
VEITQQSEYDVSNVEVQLKGLQDNTGYYIHRTPVEANLAFPCEASTLYGH
WNPFDVSPKSSPPPKRGTTDQYEMGDLSGKFGGLEGVTQFEDAYNDTNLP
LFGYNSIIGRSVVIQKKQKNARWACSTLERGYSPSEARELRAIASFHHPT
GYAYGYIKMTQLIHNDGSQSETVIEVKLRHPGKNDRNSTRNHNWQIFVNP
VGVDAAVKPTITRCVAGGYVWNPYYTQLADPLNLDLYEQECSPDNPLRCY
VGDVGARLGTIDLGGERVVLTDSNFPLEAPVGAIGRSIVIFGPDHSHERF
ACANIEPDHNVIKYINLQKPPRFVVAQFLDELRSVMGIPEWMLDVDARKT
KELHGGACIQMIIHFKGPLAHRLELDMSRLIAAGRLDAPSLFIPGYVNQK
RKATISYRTCGVRDTNEKRTKNFKGGFYSSSSAPNEPKPLVLAFVVIGLA
FRFL*
BS31763.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:49:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31028-PC | 1154 | CG31028-PC | 1..1154 | 1..1154 | 6165 | 100 | Plus |
