BS31776.complete Sequence
872 bp assembled on 2012-08-22
GenBank Submission: KX804977
> BS31776.complete
GAAGTTATCAGTCGACATGTTTCGCAACCAGTACGATAGCGATGTTACTG
TGTGGAGTCCGCAGGGACGTCTCCACCAGGTGGAGTACGCAATGGAGGCC
GTGAAACTTGGCACCGCAACCGTGGGCCTGAAAAATAAAGATTACGCTGT
ACTTGTCGCCCTGTGTAAGCCGACATCGGAGCTATCGGATACCCAGCGCA
AGATCATCCCAATCGACGATCACCTGGGCATTTCCATTGCTGGCCTCACG
GCTGATGCCCGCGTCCTTAGCCGGTACTTGCGCTCCGAGTGCCTGAACTA
CAAGCACTCGTACGATACAACCTATCCAGTCTCGCGTCTGATCACTAACC
TGGGCAACAAGATGCAGACGACCACTCAGCGCTACGATCGCCGTCCGTAT
GGAGTGGGCCTTTTGGTCGCCGGCTACGATGAGAGGGGTCCGCACATCTA
TCAGGTCACGCCATCGGCGACCTTTTTCAATTGCAAGGCCAATTCGATCG
GATCGCGTTCACAGAGTGCACGCACCTATCTGGAGAAGAATTTGAACAAG
TTCTTGGACAGTTCCAAAGATGAAATCATCCGTCACGGAATTCGCGCTAT
ACTCGGTACCCTGCCTACGGATGAGCAAGGCAAAGATGCCGGTCAGTATG
ACATCACTGTGGCCATCGTCGGCAAAGACCAGCCATTCACAATTCTCTCT
AATAAAGACAGCGCCAAGCATGTGGCGATTGCCAAAGAGAATGACAATGA
TACGCCCAGGAACGACGATGACGATGATCGCCCATCCCCCCCAGAGGAAC
CAGCAGCCGGACCACGCGACCCAGAAGTCCTGGTTGCAACCGAGCAGCGT
CCATAGAAGCTTTCTAGACCAT
BS31776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:39:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha6-RA | 840 | CG4904-PA | 1..840 | 17..856 | 4200 | 100 | Plus |
Prosalpha6-RB | 840 | CG4904-PB | 1..840 | 17..856 | 4200 | 100 | Plus |
Prosalpha6T-RA | 870 | CG5648-PA | 37..519 | 53..535 | 315 | 71 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha6-RA | 1027 | CG4904-RA | 92..932 | 16..856 | 4205 | 100 | Plus |
Prosalpha6-RB | 1070 | CG4904-RB | 92..932 | 16..856 | 4205 | 100 | Plus |
Prosalpha6T-RA | 1020 | CG5648-RA | 106..588 | 53..535 | 315 | 71 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10221513..10222144 | 19..650 | 3160 | 100 | Plus |
2L | 23513712 | 2L | 10222202..10222408 | 650..856 | 1035 | 100 | Plus |
2L | 23513712 | 2L | 13232144..13232626 | 53..535 | 315 | 71 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:39:05 has no hits.
BS31776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:12 Download gff for
BS31776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pros35-RA | 97..930 | 23..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:22 Download gff for
BS31776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha6-RB | 99..932 | 23..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:53 Download gff for
BS31776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha6-RB | 99..932 | 23..856 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:53 Download gff for
BS31776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10221517..10222143 | 23..649 | 100 | -> | Plus |
2L | 10222202..10222408 | 650..856 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:22 Download gff for
BS31776.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10221517..10222143 | 23..649 | 100 | -> | Plus |
arm_2L | 10222202..10222408 | 650..856 | 100 | | Plus |
BS31776.pep Sequence
Translation from 16 to 855
> BS31776.pep
MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALC
KPTSELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYD
TTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPS
ATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLP
TDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHVAIAKENDNDTPRND
DDDDRPSPPEEPAAGPRDPEVLVATEQRP*
BS31776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha6-PA | 279 | CG4904-PA | 1..279 | 1..279 | 1456 | 100 | Plus |
Prosalpha6-PB | 279 | CG4904-PB | 1..279 | 1..279 | 1456 | 100 | Plus |
Prosalpha6T-PA | 289 | CG5648-PA | 1..280 | 1..275 | 827 | 57.7 | Plus |
Prosalpha4T2-PB | 252 | CG4569-PB | 4..226 | 5..230 | 322 | 31.7 | Plus |
Prosalpha4T2-PA | 252 | CG4569-PA | 4..226 | 5..230 | 322 | 31.7 | Plus |