BS31792.complete Sequence
1961 bp assembled on 2012-09-26
GenBank Submission: KX804933
> BS31792.complete
GAAGTTATCAGTCGACATGTCCTGGACGGAGAAAGTCGATCCAGAGCTCA
TCTTCACCAAGCAGGAGCGCATCGGCAAGGGCTCCTTCGGCGAGGTGTTC
AAGGGCATCGACAACCGCACCCAGCAAGTGGTGGCCATCAAGATCATCGA
TCTGGAGGAGGCCGAAGATGAGATCGACGACATCCAGCAGGAGATCATGG
TGCTGTCGCAGTGCGACTCGCCGTACGTGACGAAGTACTATGGCAGCTTT
CTTAAGGGCACCAAGTTATGGATCATCATGGAGTACCTGGGCGGTGGATC
CGCCTTGGACCTCATGAAGGCCGGCTCCTTCGAGGAAATGCACATCGGGA
TCATATTGCGCGAAGTGCTTAAGGGCCTGGACTACCTGCACTCGGAGCGC
AAGCTGCATCGCGACATCAAGGCGGCCAATGTTCTGTTGAGCGAACAGGG
CGATGTCAAGCTGGCGGACTTTGGAGTCGCTGGCCAGCTGACCAACACCA
CATCCAAGAGGAACACCTTCGTGGGCACGCCCTTTTGGATGGCGCCCGAG
GTGATCAAGCAGTCACAGTACGATGCCAAGGCGGACATCTGGTCGTTGGG
CATCACGGCTATCGAACTGGCCAAGGGTGAGCCGCCCAATTCGGAGCTGC
ATCCGATGCGCGTGCTCTTCCTCATCCCCAAGAACAATCCACCCCAGCTG
ACGGGCAGCTATACCAAGTCTTTTAAGGACTTTGTGGAGGCCTGCCTAAA
CAAGGACCCGGAGAACAGGCCCACGGCCAAGGAGCTGCTCAAGTACCCGT
TCATCAAGAAGGCCAAGAAGAACGCCTATCTGATTGACCTGATCGACCGC
TTCAAGAAGTGGAAGGTCTCCAAGGGCGACGAAAGTGAGACGGAGTCTGA
GAACTCTGACTCGGACTCGGACGCCAAGCAGGGCGGCAGCAGCCAGGATG
AGCCCTGGATCATGACCGTCAAGGGCCTGCATATCAACAGTGCTCCGCGG
GCGGGTGTCAACAGCTTCCAGTTGCAGGAGCACGAGCTAACCATGCAGAA
GCTGATGCAGACCACACACTCGCCAGCCGGCGGTGGTGGCGTGCAAGCGT
CCCCTGCTGCAAATGCATTATCGTCCTCTGTGTCCGCCGTGGCGGCGTCA
GCTTCCTCCGTATCGGTCATTACAGCCAACGAAGGTGTCTCCTCTGCATC
CGCCCTGCCCCCCCAGAACAGTCACGTCCACAACCACAACCACAACAACA
TTAACAACAATAACATCAGAAACTTGAGCAACAAGCATGCCACCACCACC
ATGCTGAACGCAGCTCCTCCGCCGAGCAGCGTCACAAGCTCGTCGTCGGC
CAGTGAGCTGCAGCAGAAGCGTTCCAGCTCGAAGCCGGAGCTGCGCCAGT
CGCGATCCGCCGCCCCTCTGGATCAAGTAGAGGATCGCCGTGCCTCTTTG
GGCCTGCCATTGCAGTCGTCGGTTCCGACTCCATCGACGGCTGAGCAGCA
GCAACAGCGCCGCAGCAGCCAACGTGAATCATTCCATGCAAATAACGCCG
CGCTGGTTGCCAGCTGCAGCAGCAGTAGCAACAACCACAGCCACGAGGAG
CATGTGGCCACCAACCATGCCAGCCATGTCAAGCACTCTGGGGCGGGACA
ACGCCTAGTCCAAACGAACAGCGCCTGTCTGAACAACTTCCTCTTCCCCG
TGCTGAGCGACATCCAGCGAAAGTACTCCGGCGGAGGATCTGCAGGAAGC
GGAGGATCAGGCGGCCGTAACATAGGCGTCGGCAGCGACATCGGCGACCT
GAAGTCTGTGTTCGAGCTGGCCGAACGTTCCAGTCCGGGAGTGAGCGACC
TATTTATGAAAGAGCTGATCCACATGCTCGTTCCTGGTTACTCGGAGACG
CGAATCAATACGATCATGGACCGCGCCATACGCAACCGCAAGTAGAAGCT
TTCTAGACCAT
BS31792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GckIII-RA | 1929 | CG5169-PA | 1..1929 | 17..1945 | 9645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:16:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GckIII-RA | 2476 | CG5169-RA | 284..2214 | 15..1945 | 9655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17085796..17087726 | 15..1945 | 9655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:16:09 has no hits.
BS31792.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-26 11:03:45 Download gff for
BS31792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GckIII-RA | 265..2193 | 17..1945 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:03 Download gff for
BS31792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GckIII-RA | 286..2214 | 17..1945 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:50 Download gff for
BS31792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GckIII-RA | 286..2214 | 17..1945 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:50 Download gff for
BS31792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17085798..17087726 | 17..1945 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:03 Download gff for
BS31792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12911520..12913448 | 17..1945 | 100 | | Plus |
BS31792.pep Sequence
Translation from 16 to 1944
> BS31792.pep
MSWTEKVDPELIFTKQERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE
DEIDDIQQEIMVLSQCDSPYVTKYYGSFLKGTKLWIIMEYLGGGSALDLM
KAGSFEEMHIGIILREVLKGLDYLHSERKLHRDIKAANVLLSEQGDVKLA
DFGVAGQLTNTTSKRNTFVGTPFWMAPEVIKQSQYDAKADIWSLGITAIE
LAKGEPPNSELHPMRVLFLIPKNNPPQLTGSYTKSFKDFVEACLNKDPEN
RPTAKELLKYPFIKKAKKNAYLIDLIDRFKKWKVSKGDESETESENSDSD
SDAKQGGSSQDEPWIMTVKGLHINSAPRAGVNSFQLQEHELTMQKLMQTT
HSPAGGGGVQASPAANALSSSVSAVAASASSVSVITANEGVSSASALPPQ
NSHVHNHNHNNINNNNIRNLSNKHATTTMLNAAPPPSSVTSSSSASELQQ
KRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPTPSTAEQQQQRRS
SQRESFHANNAALVASCSSSSNNHSHEEHVATNHASHVKHSGAGQRLVQT
NSACLNNFLFPVLSDIQRKYSGGGSAGSGGSGGRNIGVGSDIGDLKSVFE
LAERSSPGVSDLFMKELIHMLVPGYSETRINTIMDRAIRNRK*
BS31792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GckIII-PA | 642 | CG5169-PA | 1..642 | 1..642 | 3283 | 100 | Plus |
| hpo-PB | 669 | CG11228-PB | 38..543 | 9..549 | 740 | 34.3 | Plus |
| hpo-PA | 669 | CG11228-PA | 38..543 | 9..549 | 740 | 34.3 | Plus |
| msn-PG | 1101 | CG16973-PG | 27..589 | 8..542 | 686 | 33.7 | Plus |
| msn-PC | 1102 | CG16973-PC | 27..589 | 8..542 | 686 | 33.7 | Plus |
