BS31805.complete Sequence
1508 bp assembled on 2012-08-22
GenBank Submission: KX803288
> BS31805.complete
GAAGTTATCAGTCGACATGTGCTGCAAGTGCTGCGGGGAAACTCAACGAA
AGGTCTGGGTCTTCGGCTTGGGATCGGTTTTCCTTTTGCTGGGAATACTA
ATCGTGGTCTTCTGGCCGGGTATTGCAGATAACCTTGTAGAGGATGGCCT
TACCCTCAAGCCCGGGACTGATGCCTATGAAAGCTGGCTGGAGGCACCTA
TCCCCATTTACCTGAGCTTTTACATGTTCAATTGGACGAATCCCGAGGAC
ATAAGGAACCCGGACATTAAGCCAAACTTCGTGGAAATGGGTCCGTACAC
CTTCCTGGAAAAGCACAAGAAGGAGAACTATACGTTTTACGATAATGCAA
CGGTGGCATATTATGAGCGCCGCACATGGTTCTTTGATCCGGAGAGATCC
AATGGCACATTGGACGACATGGTGACTGCTGCCCATGCCATTACCGCCAC
GGTAGCGGATGAGATGCGAGACCAGCGCAAGATCGTCAAAAAAATCATAA
ACTTTATGCTGAACCATGAAGGCGGAAAGTTGTACGTAACCAAGCCGGTG
GGCGAATGGATCTTCGAGGGTTACCAGGATAACATTACCGATTTCCTAAA
CCTGTTCAACACCACAAAGATCGACATACCCTACAAACGCTTCGGGTGGC
TGGCGGACCGCAATGAGTCGCTGACTTACGATGGCTTGTTTACTATTCAC
ACGGGCACTGACGATATATCTAATCTGGGTAGACTTACCCACTGGAATGG
AAAATCAGAAACTGGATTTTACGAGATGCCTTGTGGCATTGTTAATGGAA
CCACGGGCGACATGTTCCCGCCAAAGATGAATGTAAACGATGAGATTACG
ATTTTTGCCACCGATGCTTGCAGATTTATGAACCTCCGGCCCCGGGGCAC
ATACGAGAATCACGGCCTGACCGCCACTAAGTGGGTAGGCACCGAGGAGA
CTCTGGACTCCGGAGAAAACTACCCTAACCAGGCGTGCTTCTGTGATGAG
GCGCGATTTGATGAATGTCCCAAGACCGGTGTCGTGGAGTGCAAGGCGTG
CCGAGACAAAGCACCCATTTACTCCTCCTTCCCTCACTTTTACCTAGCGG
ATCAGTCGTATGTTGATGCTGTCAGTGGAATGAAGCCGGAGAAGGAGAAG
CACGAGTTCTTCCTAGCCGTGGAACCGATTACTGGAGTGCCTGTCCAAGT
GCATGGACGCATCCAGATTAATATGATGATTGAGCCCGATGACGACTTCG
ACATATATCGTGGAGTGCAAAAGGTTTTAATGCCCATGTTCTGGTTCGAT
CAGTATGCAGAGCTCTCCTCCGAATTGGCATCGAAGGCCAAGTTAGCCAT
TAATTTGTCCAGTTACGGAATCATATTCGGCTATTCCATGATAGCTTTTG
CCAGTGTCTTTCTCATCACCGGCATCACGCTGACTGTGACGAAAAAGTGG
GTGCGGCGAACTCCCGAGGATGAGGACATACTTACCAACTAGAAGCTTTC
TAGACCAT
BS31805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crq-RC | 1476 | CG4280-PC | 1..1476 | 17..1492 | 7365 | 99.9 | Plus |
| crq-RE | 1476 | CG4280-PE | 1..1476 | 17..1492 | 7365 | 99.9 | Plus |
| crq-RD | 1476 | CG4280-PD | 1..1476 | 17..1492 | 7365 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crq-RC | 1938 | CG4280-RC | 157..1634 | 16..1493 | 7375 | 99.9 | Plus |
| crq-RE | 2714 | CG4280-RE | 471..1948 | 16..1493 | 7375 | 99.9 | Plus |
| crq-RD | 2041 | CG4280-RD | 260..1737 | 16..1493 | 7375 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 449435..450540 | 1251..146 | 5530 | 100 | Minus |
| 2L | 23513712 | 2L | 449020..449172 | 1493..1341 | 750 | 99.3 | Minus |
| 2L | 23513712 | 2L | 450665..450795 | 146..16 | 655 | 100 | Minus |
| 2L | 23513712 | 2L | 449230..449320 | 1342..1252 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:50:28 has no hits.
BS31805.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:18 Download gff for
BS31805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crq-RC | 158..1633 | 17..1492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:48 Download gff for
BS31805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crq-RD | 261..1736 | 17..1492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:01 Download gff for
BS31805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crq-RD | 261..1736 | 17..1492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:01 Download gff for
BS31805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 449021..449170 | 1343..1492 | 99 | <- | Minus |
| 2L | 449230..449320 | 1252..1342 | 100 | <- | Minus |
| 2L | 449435..450540 | 146..1251 | 100 | <- | Minus |
| 2L | 450666..450794 | 17..145 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:48 Download gff for
BS31805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 449021..449170 | 1343..1492 | 99 | <- | Minus |
| arm_2L | 449230..449320 | 1252..1342 | 100 | <- | Minus |
| arm_2L | 449435..450540 | 146..1251 | 100 | <- | Minus |
| arm_2L | 450666..450794 | 17..145 | 100 | | Minus |
BS31805.pep Sequence
Translation from 16 to 1491
> BS31805.pep
MCCKCCGETQRKVWVFGLGSVFLLLGILIVVFWPGIADNLVEDGLTLKPG
TDAYESWLEAPIPIYLSFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKH
KKENYTFYDNATVAYYERRTWFFDPERSNGTLDDMVTAAHAITATVADEM
RDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNLFNTT
KIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETG
FYEMPCGIVNGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHG
LTATKWVGTEETLDSGENYPNQACFCDEARFDECPKTGVVECKACRDKAP
IYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEPITGVPVQVHGRIQ
INMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASKAKLAINLSSY
GIIFGYSMIAFASVFLITGITLTVTKKWVRRTPEDEDILTN*
BS31805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crq-PC | 491 | CG4280-PC | 1..491 | 1..491 | 2670 | 100 | Plus |
| crq-PE | 491 | CG4280-PE | 1..491 | 1..491 | 2670 | 100 | Plus |
| crq-PD | 491 | CG4280-PD | 1..491 | 1..491 | 2670 | 100 | Plus |
| crq-PB | 491 | CG4280-PB | 1..491 | 1..491 | 2670 | 100 | Plus |
| crq-PA | 491 | CG4280-PA | 1..491 | 1..491 | 2670 | 100 | Plus |
