BS31873.complete Sequence
1055 bp assembled on 2012-08-22
GenBank Submission: KX804831
> BS31873.complete
GAAGTTATCAGTCGACATGCGCGACGCACCAGAAGATCAGTCCGTAACGG
TTTCCATGCCGGCATCTGCATCCGGCTCTGCCGCCGGCTCCACGGGACCG
TCATCGGATCGCCGGATGACGCAGCGCCTGCTCGTGGAGCTCCTGGTGGT
GGTGGTGCTCGTCATTCCCATCTGCGTGTACGAGTTCGCGGTGGATCCCG
TGCGACGCGGCTTTTTCTGCGACGACGAGAGCATCAGCTATCCATTCCAG
GACAACACCATAACGCCGGTAATGCTCGGCCTGATCGTGGGCCTGCTTCC
GGCCCTGGTCATGGTGGTGGTGGAGTACGTTAGCCACCTGCGCGCCGGAG
ACATCTCGGCCACGGTGGATCTGCTTGGCTGGAGGGTATCCACATGGTAC
GTGGAGCTGGGCCGGCAGTCCACCTACTTCTGCTTTGGCCTGCTGCTCAC
CTTTGACGCTACCGAGGTGGGCAAGTACACCATCGGACGCCTGAGACCGC
ACTTCCTGGCCGTTTGCCAGCCGCAGATTGCGGATGGGAGCATGTGCTCC
GATCCGGTCAACCTGCACCGCTACATGGAGAACTACGACTGCGCCGGCGA
GGGCTTCACCGTGGAGGACGTGCGACAGGCCCGCCTCAGCTTTCCCAGCG
GTCACTCTAGTTTGGCCTTCTATGCCATGATCTACGTGGCACTCTACCTC
CAGCGGAAGATCACCTGGCGGGGATCGAAGCTGAGCCGGCACTTTGTGCA
GTTCGCAGTGGTGATGGTAGCCTGGTATACGGCCCTCAGCCGTGTAATGG
ACCATTGGCACCACTGGTCCGACGTCCTTTCCGGATCGCTACTTGGCGTG
GCTGGCGCTCTAATCACCGCCCACTATATAGCAAGGATGTTCGACGACGG
GGCAAGCAATATTCTAAGCGGTGGCCTGAGGAGGGAAAACACAGCGGCCA
CTCTGCAGGAAGAGGTCTGCCCCACCACTCCCCCGCCGTACTCCGTGAAC
AACAGCTTCAGCGAGGATCAGTACTGCTCTAAGGTTTAGAAGCTTTCTAG
ACCAT
BS31873.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11426-RA | 1023 | CG11426-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
| wun-RC | 1095 | CG8804-PC | 790..1005 | 632..847 | 210 | 73.1 | Plus |
| wun-RA | 903 | CG8804-PA | 553..768 | 632..847 | 210 | 73.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11426-RA | 1882 | CG11426-RA | 591..1613 | 17..1039 | 5115 | 100 | Plus |
| wun-RC | 1563 | CG8804-RC | 1172..1387 | 632..847 | 210 | 73.1 | Plus |
| wun-RA | 1626 | CG8804-RA | 772..987 | 632..847 | 210 | 73.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22472218..22473240 | 17..1039 | 5115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:52:15 has no hits.
BS31873.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:27:25 Download gff for
BS31873.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 589..1611 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:20 Download gff for
BS31873.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 591..1613 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:39 Download gff for
BS31873.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 591..1613 | 17..1039 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:39 Download gff for
BS31873.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22472218..22473240 | 17..1039 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:20 Download gff for
BS31873.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22465318..22466340 | 17..1039 | 100 | | Plus |
BS31873.pep Sequence
Translation from 16 to 1038
> BS31873.pep
MRDAPEDQSVTVSMPASASGSAAGSTGPSSDRRMTQRLLVELLVVVVLVI
PICVYEFAVDPVRRGFFCDDESISYPFQDNTITPVMLGLIVGLLPALVMV
VVEYVSHLRAGDISATVDLLGWRVSTWYVELGRQSTYFCFGLLLTFDATE
VGKYTIGRLRPHFLAVCQPQIADGSMCSDPVNLHRYMENYDCAGEGFTVE
DVRQARLSFPSGHSSLAFYAMIYVALYLQRKITWRGSKLSRHFVQFAVVM
VAWYTALSRVMDHWHHWSDVLSGSLLGVAGALITAHYIARMFDDGASNIL
SGGLRRENTAATLQEEVCPTTPPPYSVNNSFSEDQYCSKV*
BS31873.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11426-PA | 340 | CG11426-PA | 1..340 | 1..340 | 1779 | 100 | Plus |
| wun-PA | 300 | CG8804-PA | 3..271 | 30..292 | 651 | 43.9 | Plus |
| wun-PB | 379 | CG8804-PB | 82..350 | 30..292 | 651 | 43.9 | Plus |
| wun-PC | 364 | CG8804-PC | 82..344 | 30..286 | 632 | 43.7 | Plus |
| wun2-PA | 350 | CG8805-PA | 69..344 | 13..283 | 556 | 39.8 | Plus |
