BS31937.complete Sequence
1220 bp assembled on 2013-01-15
GenBank Submission: KX806072
> BS31937.complete
GAAGTTATCAGTCGACATGAAGCGAAATCGTCGTGCATTTGCTGGAAACA
ACAAGCCATTTGTCTTTGGAGGCATTTACGCCGCCAATGTCCAGGAGCAG
CAGTCTTCTCCGGTGGCTTTATATCCGACATCGGCCTCCCCGGTGGCTGT
TCAATCGCCACAGGACGCATTTTTGGCTGTTCAGTCGCCAGGGGCTCCTG
CCCCCGTTCAACTGGCCAACTCGTCCGACCAGCAGAATAATCCGGATGCG
GACGCCATTGCCTCCAAACTGCCCATGCCAGTTATCATCAAGGAGGAGCC
GATCTCTGTCAACGATGAACCGTCCGTCGACAATATAGAGGACAATACCA
GTGCCAGTACCAGTGCCAGCGGCATCGGGGGCAAGATCCCATTTAAAAAA
ATCTTCCAAAAGCGCAAGAAGTCGTCTGAACGCACTCGGGACAAGAAGTT
GCGACAGAACCGCCAGCTGCGCAAGTCCATGCTCCCCAAGAACGCTCTGA
TGGCCCTCAACGAGGTGAAGGGCGTGACCATCAGCGATTTCACCATCGAC
AGCAATACCGACGGGGGATTCACGGCCGTTGTCACTGTCAACTCGAATCA
GTACGAGGGCAAGGGTACCTCGAAAATGACAGCCAAGAACGCGGCCTGCG
AGAAGGCTTGGCGCGATTTTATTATTGCAAAAATGACCCCCAAGCCGCCC
CGTATTCACCAGGTGGAGATGGGTTCGGAGCCAATGGATATCAACGAGGA
TGAGGCCGATGCACCGGATGATGATCTGCCCATGTTGAATCTGGCCTCGT
TTGCCATCTACAAGCTGTTCGCGGAGTGGGAACGGGAGGGCTATGTCGTG
CCCGAGATGCACCCTTCGGCCAATGCTGCCCAACAGGCGGGAGGGGATGC
CGGAACTCCAGTTCCCCCCGTGCCGAAGGAGCCAAAGAAGCCGCCAGTGC
GCACCGAGCTACCCTCTGGCTGGGAGACCATGCACCCGGCGACCATTCTT
TGCATTATGCGTCCGGGACTCAACTACGTGGACTACGGGTCATCTGGCGA
CAAGACCAACGGCATGCAGCATCTGGGAATCATGGTGGACAACCAGGAGT
TCCACGCCAACGGCAGATCAAAGAAAATCGCCCGTCGCAACGTGGCCGTG
AAAGTGTGCAACTCTCTGTTCGGCACCAACTTCACCTACAGCGACACCAC
TTAAAAGCTTTCTAGACCAT
BS31937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:08:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-RC | 1188 | CG17686-PC | 1..1188 | 17..1204 | 5940 | 100 | Plus |
| DIP1-RI | 1137 | CG17686-PI | 13..1137 | 80..1204 | 5625 | 100 | Plus |
| DIP1-RG | 1137 | CG17686-PG | 13..1137 | 80..1204 | 5625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-RC | 2559 | CG17686-RC | 113..1300 | 17..1204 | 5940 | 100 | Plus |
| DIP1-RI | 3477 | CG17686-RI | 1094..2218 | 80..1204 | 5625 | 100 | Plus |
| DIP1-RH | 2466 | CG17686-RH | 83..1207 | 80..1204 | 5625 | 100 | Plus |
| DIP1-RI | 3477 | CG17686-RI | 113..175 | 17..79 | 315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21626313..21626891 | 1006..428 | 2895 | 100 | Minus |
| X | 23542271 | X | 21628361..21628709 | 428..80 | 1745 | 100 | Minus |
| X | 23542271 | X | 21626055..21626252 | 1204..1007 | 990 | 100 | Minus |
| X | 23542271 | X | 21629973..21630036 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:08:00 has no hits.
BS31937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-15 17:08:43 Download gff for
BS31937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RC | 123..1308 | 17..1202 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:15 Download gff for
BS31937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RC | 123..1308 | 17..1202 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:21:48 Download gff for
BS31937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RC | 113..1298 | 17..1202 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:21:48 Download gff for
BS31937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21629974..21630036 | 17..79 | 100 | | Minus |
| X | 21626057..21626252 | 1007..1202 | 100 | <- | Minus |
| X | 21626313..21626890 | 429..1006 | 100 | <- | Minus |
| X | 21628361..21628709 | 80..428 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:15 Download gff for
BS31937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21501001..21501063 | 17..79 | 100 | | Minus |
| arm_X | 21497084..21497279 | 1007..1202 | 100 | <- | Minus |
| arm_X | 21497340..21497917 | 429..1006 | 100 | <- | Minus |
| arm_X | 21499388..21499736 | 80..428 | 100 | <- | Minus |
BS31937.pep Sequence
Translation from 16 to 1203
> BS31937.pep
MKRNRRAFAGNNKPFVFGGIYAANVQEQQSSPVALYPTSASPVAVQSPQD
AFLAVQSPGAPAPVQLANSSDQQNNPDADAIASKLPMPVIIKEEPISVND
EPSVDNIEDNTSASTSASGIGGKIPFKKIFQKRKKSSERTRDKKLRQNRQ
LRKSMLPKNALMALNEVKGVTISDFTIDSNTDGGFTAVVTVNSNQYEGKG
TSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEMGSEPMDINEDEADAP
DDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSANAAQQAGGDAGTPVP
PVPKEPKKPPVRTELPSGWETMHPATILCIMRPGLNYVDYGSSGDKTNGM
QHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSLFGTNFTYSDTT*
BS31937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-PC | 395 | CG17686-PC | 1..395 | 1..395 | 2057 | 100 | Plus |
| DIP1-PD | 410 | CG17686-PD | 1..410 | 1..395 | 2031 | 96.3 | Plus |
| DIP1-PB | 409 | CG17686-PB | 27..409 | 13..395 | 1951 | 98.2 | Plus |
| DIP1-PI | 378 | CG17686-PI | 3..378 | 20..395 | 1944 | 99.5 | Plus |
| DIP1-PG | 378 | CG17686-PG | 3..378 | 20..395 | 1944 | 99.5 | Plus |
