BS31976.complete Sequence
854 bp assembled on 2013-01-15
GenBank Submission: KX800201
> BS31976.complete
GAAGTTATCAGTCGACATGAAGACTTTCGTTACTTCCTGGGCCGATGAGG
TGGATGCGGACTATGTGGATGGACTGCCGCCTTCTAATGAGTACATTAAG
GGCGACTTCAAGTACGTGACGGAGTATAAGTTCAACGATGATGGCAAGAA
GGTGAAAGTGGTGCGAACCTTCAAGATCGAGAAGCAGATTGTTCCGAAGG
CTGTGGCTCGTCGTCGCAACTGGGTTAAGTTTGGGGATTCGCGATCGGAC
AAGCCCGGACCCAATTCCCAGACGACAATGGCCTCCGAGGAGATCTTTAT
GCAATTCATCGGCTCCAAAGATTTCGACCAGACCCACGAAACCCAACTTG
ATCCCGGCAAGAACATCGCCAAGTGCCGCATTTGCAATGGCGAACACTGG
AGTGTCAATTGTCCCTACAAGGGCACCTCGATGGATAGCAAAACCGTGAT
GGAAACCAAGGCCAATGCCGCTGCAGCTGCCGCTATAAGTGATCCCAGCA
AGACCGGAAAATATGTACCACCCTTCATGAAGGACGGCGGAGGCATATCT
GGCAGCAAAAATTGGGGACGGGGTCGGGATCGGGACGATTCGTCGGCAGT
TCGCATCTCAAACCTATCCGAATCCATGACCGAGACTGATCTCGAGGAGC
TGGTAAAGAAAATCGGACCACACACCAAGATGTATTTGGCGCGCGAAAAA
AACAGCGGCCTCTGCAAGGGATTCGCCTACGTGCACTTCAAGTTCCGCCA
GGATGCAGCTGCCGCCATTGAGGTTCTTAATGGCCACGGCTACGACCACT
TGATCCTCTGCGTCGAGTGGTCCAAGCCTCAGCCGTAAAAGCTTTCTAGA
CCAT
BS31976.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-RA | 822 | CG10881-PA | 1..822 | 17..838 | 4110 | 100 | Plus |
| CG8636-RA | 810 | CG8636-PA | 595..801 | 626..832 | 570 | 85 | Plus |
| CG8636-RA | 810 | CG8636-PA | 100..425 | 110..435 | 370 | 74.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-RA | 979 | CG10881-RA | 63..884 | 17..838 | 4110 | 100 | Plus |
| CG8636-RA | 1027 | CG8636-RA | 686..892 | 626..832 | 570 | 85 | Plus |
| CG8636-RA | 1027 | CG8636-RA | 191..516 | 110..435 | 370 | 74.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20408327..20409148 | 17..838 | 4110 | 100 | Plus |
| X | 23542271 | X | 2609382..2609588 | 832..626 | 570 | 85 | Minus |
| X | 23542271 | X | 2609758..2610083 | 435..110 | 370 | 74.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:07:55 has no hits.
BS31976.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-15 17:08:43 Download gff for
BS31976.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..882 | 17..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:12 Download gff for
BS31976.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..882 | 17..836 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:21:47 Download gff for
BS31976.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..882 | 17..836 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:21:47 Download gff for
BS31976.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20408327..20409146 | 17..836 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:12 Download gff for
BS31976.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16234049..16234868 | 17..836 | 100 | | Plus |
BS31976.pep Sequence
Translation from 16 to 837
> BS31976.pep
MKTFVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVR
TFKIEKQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGS
KDFDQTHETQLDPGKNIAKCRICNGEHWSVNCPYKGTSMDSKTVMETKAN
AAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNL
SESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAA
IEVLNGHGYDHLILCVEWSKPQP*
BS31976.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-PA | 273 | CG10881-PA | 1..273 | 1..273 | 1461 | 100 | Plus |
| CG8636-PA | 269 | CG8636-PA | 4..267 | 1..272 | 989 | 70 | Plus |
