BS32009.complete Sequence
674 bp assembled on 2012-12-19
GenBank Submission: KX805921
> BS32009.complete
GAAGTTATCAGTCGACATGAAGGAAATAAAAAGGAAATCAAAGCCAAAAC
GCAAGCCCACTCGCATGGAAGTGGAGGAGATTGAGACCTCGGATAAACCA
CAGCCAGAGGATGGTGAGTCTGCGAATGGGGAGGCAAATCCCTCGGATGA
AGGCGATGAAATGGAGCTGGCCAGCTTCAAAGCCGCCTGCAGTTCCTCGG
ATCCCGCGAAGAAAATCAAGAAGGGCATCATTTACATATCCAACATACCC
AAGCACATGACCTTGACCCACCTGCGGGAAATCTTGGGCGAGTACGGCGG
CATCGGCAGAGCTTTCCTGCGGTCGCAGTCAAGTAAGCATCATAATATCC
TCTTCGCCGAGGGTTGGGTGGAATTCAAGTCGAAACATGTGGCCAAACAG
CTCGTTCTACTGCTGAACAATAAGCAGATATCCACGCGCAATAATTCCCC
ATTCTATTACTCACTGTGGAGCATGGAGTACCTGCCGCGCTTCAAGTGGG
CCCGTCTAGCCGAGCTCATGAACTTCGTGCAGGTCACCAACTCCCAGAAC
CATCTCGAGTTCCTCAAGAAGAAGGCGAAGGAGGCCAAGGAAGTCAAGAA
AGCCATGAAGGTTCTGGCTGACAGACTTCTTGAGTTAGCGCTAGACTCTA
ACATCTAAAAGCTTTCTAGACCAT
BS32009.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:02:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG41562-RA | 642 | CG41562-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
| CG40813-RB | 642 | CG40813-PB | 1..642 | 17..658 | 3165 | 99.5 | Plus |
| CG10993-RA | 633 | CG10993-PA | 186..633 | 217..658 | 1530 | 90 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG41562-RA | 642 | CG41562-RA | 1..642 | 17..658 | 3210 | 100 | Plus |
| CG40813-RB | 642 | CG40813-RB | 1..642 | 17..658 | 3165 | 99.5 | Plus |
| CG10993-RA | 715 | CG10993-RA | 224..671 | 217..658 | 1530 | 90 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22168088..22168413 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22173074..22173399 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22177938..22178263 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22182926..22183251 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22187803..22188128 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22192706..22193031 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22197607..22197932 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22202616..22202941 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22212761..22213086 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22217812..22218137 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22227006..22227331 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22232003..22232328 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22236998..22237323 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22247033..22247358 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22252015..22252340 | 333..658 | 1630 | 100 | Plus |
| X | 23542271 | X | 22143491..22143816 | 333..658 | 1615 | 99.7 | Plus |
| X | 23542271 | X | 22148222..22148547 | 333..658 | 1615 | 99.7 | Plus |
| X | 23542271 | X | 22153275..22153600 | 333..658 | 1615 | 99.7 | Plus |
| X | 23542271 | X | 22152886..22153203 | 17..334 | 1590 | 100 | Plus |
| X | 23542271 | X | 22236609..22236926 | 17..334 | 1590 | 100 | Plus |
| X | 23542271 | X | 22241616..22241933 | 17..334 | 1590 | 100 | Plus |
| X | 23542271 | X | 22246644..22246961 | 17..334 | 1590 | 100 | Plus |
| X | 23542271 | X | 22251626..22251943 | 17..334 | 1590 | 100 | Plus |
| X | 23542271 | X | 22158320..22158645 | 333..658 | 1585 | 99.1 | Plus |
| X | 23542271 | X | 22163356..22163681 | 333..658 | 1585 | 99.1 | Plus |
| X | 23542271 | X | 22242005..22242330 | 333..658 | 1585 | 99.1 | Plus |
| X | 23542271 | X | 22197218..22197535 | 17..334 | 1575 | 99.7 | Plus |
| X | 23542271 | X | 22202227..22202544 | 17..334 | 1575 | 99.7 | Plus |
| X | 23542271 | X | 22212372..22212689 | 17..334 | 1575 | 99.7 | Plus |
| X | 23542271 | X | 22226617..22226934 | 17..334 | 1575 | 99.7 | Plus |
| X | 23542271 | X | 22143102..22143419 | 17..334 | 1560 | 99.4 | Plus |
| X | 23542271 | X | 22147833..22148150 | 17..334 | 1560 | 99.4 | Plus |
| X | 23542271 | X | 22167699..22168016 | 17..334 | 1560 | 99.4 | Plus |
| X | 23542271 | X | 22192317..22192634 | 17..334 | 1560 | 99.4 | Plus |
| X | 23542271 | X | 22217423..22217740 | 17..334 | 1560 | 99.4 | Plus |
| X | 23542271 | X | 22157931..22158248 | 17..334 | 1545 | 99.1 | Plus |
| X | 23542271 | X | 22162967..22163284 | 17..334 | 1545 | 99.1 | Plus |
| X | 23542271 | X | 22231614..22231931 | 17..334 | 1545 | 99.1 | Plus |
| X | 23542271 | X | 22177549..22177866 | 17..334 | 1530 | 98.7 | Plus |
| X | 23542271 | X | 22182537..22182854 | 17..334 | 1530 | 98.7 | Plus |
| X | 23542271 | X | 22187414..22187731 | 17..334 | 1530 | 98.7 | Plus |
| X | 23542271 | X | 22172685..22173002 | 17..334 | 1515 | 98.4 | Plus |
| X | 23542271 | X | 13790382..13790705 | 658..335 | 1170 | 90.7 | Minus |
| X | 23542271 | X | 9085985..9086298 | 17..318 | 755 | 83.4 | Plus |
| X | 23542271 | X | 9086421..9086621 | 333..533 | 585 | 86.1 | Plus |
| X | 23542271 | X | 13790887..13791073 | 191..17 | 480 | 85 | Minus |
| X | 23542271 | X | 13790777..13790888 | 328..217 | 440 | 92.9 | Minus |
| X | 23542271 | X | 9087279..9087402 | 88..214 | 225 | 80.3 | Plus |
| X | 23542271 | X | 9088512..9088629 | 94..214 | 195 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:02:04 has no hits.
BS32009.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:54 Download gff for
BS32009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG41562-RA | 1..640 | 17..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:46 Download gff for
BS32009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG41562-RA | 1..640 | 17..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:47 Download gff for
BS32009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG41562-RA | 1..640 | 17..656 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:47 Download gff for
BS32009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22236609..22236924 | 17..332 | 100 | -> | Plus |
| X | 22236998..22237321 | 333..656 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:46 Download gff for
BS32009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ArmU | 5467096..5467411 | 17..332 | 99 | -> | Plus |
| ArmU | 5467485..5467808 | 333..656 | 100 | | Plus |
BS32009.pep Sequence
Translation from 16 to 657
> BS32009.pep
MKEIKRKSKPKRKPTRMEVEEIETSDKPQPEDGESANGEANPSDEGDEME
LASFKAACSSSDPAKKIKKGIIYISNIPKHMTLTHLREILGEYGGIGRAF
LRSQSSKHHNILFAEGWVEFKSKHVAKQLVLLLNNKQISTRNNSPFYYSL
WSMEYLPRFKWARLAELMNFVQVTNSQNHLEFLKKKAKEAKEVKKAMKVL
ADRLLELALDSNI*
BS32009.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG41562-PA | 213 | CG41562-PA | 1..213 | 1..213 | 1093 | 100 | Plus |
| CG40813-PB | 213 | CG40813-PB | 1..213 | 1..213 | 1080 | 99.1 | Plus |
| CG10993-PA | 210 | CG10993-PA | 1..210 | 1..213 | 784 | 74.9 | Plus |
| CG32708-PA | 239 | CG32708-PA | 1..236 | 1..202 | 631 | 57.6 | Plus |
| CG32706-PA | 230 | CG32706-PA | 1..215 | 17..208 | 321 | 40.8 | Plus |
