Clone BS32023 Report

Search the DGRC for BS32023

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:320
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG9107-RA
Protein status:BS32023.pep: full length peptide match
Sequenced Size:853

Clone Sequence Records

BS32023.complete Sequence

853 bp assembled on 2012-12-19

GenBank Submission: KX801085

> BS32023.complete
GAAGTTATCAGTCGACATGGTTGAACTGGAGGGCTATGTAGTGGTGCCGC
TGCGCACGACGCCGAAGGCGCAACATTGCCACAGTATCTACATGCGGGAG
CACTTCATCCGTCTGATGGATCCCAACAAACCGAAGGGACGCACACTCTT
TCTGCTCAACGTGCCGCCCTACGTGACAGAGGACAGCCTGCGCACGGTCT
TCGGCCGGGCGGGGAGCATCGAGGCCGTGGAGTTCGCCGCCAAACCGGGC
AAGGAGGAGACCATCAAGTGGTACGAGGGCACCGGCGAACCCTTCTCCAA
CACTCGTCCGCCCTTCGTCTTCAAGGTGGCCTACATAGTGTTCGAGAAGA
ACAGCAGCATCGGCAAGGCGCTGGCACTAAAGAGCATTGACCTGTTCAAC
AGCAGCGGCGAGTGCATCGTCAAGACCGGCATGGAGCTGTGGCACGAGGA
GTACGACTGCAATTACCTGCTGGATGCGCAAAAGACGAAGCTACAGATCA
GCAAGTACATGGCCGGCTACGACAAGAGGGAGCGAGCGGCGGCACAGGCG
GCCAAGACCGGAGAGGCCGACGCCGACGGATGGGTCACCGTCGGCAAGGA
GGGTCGCAATGCTGGCTTCGAGCAGAAGGCGTCCGTAATTGGACGCCTGG
AGGAGAAGGTGGCCAAGGGCAATAAGACCAAGGAGCTAAAGAACTTCTAC
ACCTTCCAAATACGCGAGAGCAAGATGCAGAATATCGTCGAGATGCGCAA
GAAGTTCGAGGAGGAAAAGCGAAAGATCGGGCTGCTCAAGCAGTCGCGCC
GCTTCAAACCATTTTAGAAGCTTTCTAGACCATTCGTGGGCGCTTTAAAA
GGG

BS32023.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-RB 801 CG9107-PB 1..801 17..817 4005 100 Plus
CG9107-RA 801 CG9107-PA 1..801 17..817 4005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-RB 922 CG9107-RB 76..876 17..817 4005 100 Plus
CG9107-RA 1534 CG9107-RA 76..876 17..817 4005 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6023609..6024386 817..40 3890 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:02:09 has no hits.

BS32023.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:54 Download gff for BS32023.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RB 72..872 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:48 Download gff for BS32023.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RA 76..876 17..817 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:49 Download gff for BS32023.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RA 76..876 17..817 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:49 Download gff for BS32023.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6023609..6024384 42..817 100 <- Minus
2L 6024440..6024464 17..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:48 Download gff for BS32023.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6023609..6024384 42..817 100 <- Minus
arm_2L 6024440..6024464 17..41 100   Minus

BS32023.pep Sequence

Translation from 16 to 816

> BS32023.pep
MVELEGYVVVPLRTTPKAQHCHSIYMREHFIRLMDPNKPKGRTLFLLNVP
PYVTEDSLRTVFGRAGSIEAVEFAAKPGKEETIKWYEGTGEPFSNTRPPF
VFKVAYIVFEKNSSIGKALALKSIDLFNSSGECIVKTGMELWHEEYDCNY
LLDAQKTKLQISKYMAGYDKRERAAAQAAKTGEADADGWVTVGKEGRNAG
FEQKASVIGRLEEKVAKGNKTKELKNFYTFQIRESKMQNIVEMRKKFEEE
KRKIGLLKQSRRFKPF*

BS32023.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-PB 266 CG9107-PB 1..266 1..266 1385 100 Plus
CG9107-PA 266 CG9107-PA 1..266 1..266 1385 100 Plus