Clone BS32035 Report

Search the DGRC for BS32035

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:320
Well:35
Vector:pDNR-Dual
Associated Gene/TranscripteIF-2beta-RA
Protein status:BS32035.pep: full length peptide match
Sequenced Size:971

Clone Sequence Records

BS32035.complete Sequence

971 bp assembled on 2012-12-19

GenBank Submission: KX803923

> BS32035.complete
GAAGTTATCAGTCGACATGGACGCGGAAGACGGTTTTGATCCCACTTTGC
TGAAAAAGAAGAAGAAGAAGAAGACCACGTTCGATCTGGACGCGGCATTG
GGTCTGGAGGATGACACCAAGAAGGAGGATCCCCAGGATGAGGCATCGGC
GGAAGGAGGTGCCGCCGCCGAGGAGGATAATCTAGATCTGGAGAGTTTCG
GCAAGAAGAAGAAAAAGAAGAAGAAGCCCTTCAACATGGACGAAATCGAA
GCGGCCATACCCAGCTTTGGCGGCGATGATGTGGCCGCCAGCGAGGAGCC
CGAGGAGGAGGAGATCAATCTGGACATGGACTTCTCGATGGCCAAAAAGA
AGAAGAAGAGCAAGAAGAAGGAACTGGACGAGCTGTTTGCGGACCAAGCG
GACGACGACAAGAGCGAAGACAAAGAGAACGACGAGGACAACAGCTCAAC
CTGGTTTGGCTCCGACCGCGATTACACATACGACGAGTTGCTGAAGCGGG
TCTTCGAAATCATTCTCGACAAGAATCCGGACATGGCCGCCGGCCGAAAG
CCAAAGTTCGTGATGCGACCGCCGCAGGTGCTGCGCGTGGGAACCAAGAA
GACCTCCTTTGCCAACTTCATGGACATTGCGAAAACGCTGCATCGCCTGC
CCAAGCATCTGCTCGATTTCCTGCTGGCCGAGTTGGGTACCAGTGGCTCC
ATGGACGGCAACCAGCAGCTGATCATCAAGGGCCGTTTCCAGCCCAAACA
GATCGAGAATGTGCTGCGTCGCTACATCAAGGAGTACGTCACCTGTCACA
CCTGCCGCTCCCCGGAAACGATATTGCAGAAGGACACGCGTCTCTTCTTC
CTGCAGTGCGAATCCTGTGGCTCCCGCTGCTCGGTGGCCAGCATTAAGTC
AGGTTTCCAGGCTGTCACCGGCAAACGTGCCGCCATACGAGCAAAAACAA
CCTAAAAGCTTTCTAGACCAT

BS32035.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-RA 939 CG4153-PA 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-RA 1128 CG4153-RA 129..1068 17..956 4700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12525153..12525678 956..431 2630 100 Minus
3L 28110227 3L 12525986..12526385 431..32 2000 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:01:48 has no hits.

BS32035.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:52 Download gff for BS32035.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 135..1071 17..953 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:40 Download gff for BS32035.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 135..1071 17..953 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:41 Download gff for BS32035.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 129..1065 17..953 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:41 Download gff for BS32035.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12525156..12525677 432..953 100 <- Minus
3L 12525986..12526385 32..431 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:40 Download gff for BS32035.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12518256..12518777 432..953 100 <- Minus
arm_3L 12519086..12519485 32..431 100 <- Minus

BS32035.pep Sequence

Translation from 16 to 954

> BS32035.pep
MDAEDGFDPTLLKKKKKKKTTFDLDAALGLEDDTKKEDPQDEASAEGGAA
AEEDNLDLESFGKKKKKKKKPFNMDEIEAAIPSFGGDDVAASEEPEEEEI
NLDMDFSMAKKKKKSKKKELDELFADQADDDKSEDKENDEDNSSTWFGSD
RDYTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQVLRVGTKKTSFAN
FMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIENVL
RRYIKEYVTCHTCRSPETILQKDTRLFFLQCESCGSRCSVASIKSGFQAV
TGKRAAIRAKTT*

BS32035.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-PA 312 CG4153-PA 1..312 1..312 1611 100 Plus