BS32037.complete Sequence
1919 bp assembled on 2013-05-17
GenBank Submission: KX800907
> BS32037.complete
GAAGTTATCAGTCGACATGCCTCGTATAGTTCCACTGCAATTGCTGAGGT
GCCTGCGGGTGCTTTTGGACAATAATGGTGGAATTTTAAGTGCAGTGGAG
GTGAAACGCATTTCGGGTTTGATGGCCAAGTATTCAAAAAAACTCGTCTC
GAAATGTGTGTATGTACAAATTCTGAAATCCACAAAGACGGAACTATTGG
GCGACTTTATGGCGGTGGGCGGTTGGTCGCTGGTCTACACCTGGTTAAAT
GATGCCATCAGGGCCATGAACTGGCCGCTGGTACAGGAGATCCTGGAACT
GCTGCTCCTTTCTCCCGTGGATGTCAATCGCCTCAAGATAAACTCAGCAC
CTATTCTGGTCAAGGGGCTGTGCAAGGATGGCGGCAACGAAGGTGTACGC
ATTCTAGCCAAGCGTTTGGTAGAGCAGTGGCTGAAGATTGTGACGGAAAA
CACAAGCATGACGATCCAAGGTGCTGCGCCACATATTGCAGCCACTACTG
CCTCTCAGGTTCCTGCATCCGTTTCTGGAGCTGGCTCCGCTTCAGTTCCG
GACTCTGCCTCTTCTTCAGACAGCACTGATAGCGCCGGAGCACCTGTGAC
GTATACCATCACCTCGGCGGCCAACAGTAGCAATTCCAACAGCATTACCA
TCAAGTGGAAGCCTTTGTTGGACAACCCAGATGGTGGCGACGAAACGGAT
TCTGGCACACAATCGAAAGACAACGAGGTGGAACATCTGGAAAAGGGCTC
CTCCGCAACCCACTTATTAGCAGATGCTAGTCTGGGGAAAAAGTCCGGGT
TAGATGATAGTAGCTCCGCGGCGGAGGTTAAGTCTGGGGAGGACGTGGAT
AATAAGAAGCATAAGAGCTCAAAGAGCGACAAAAGTAAACGGTCCGAGAA
GGAGCGCGAGAAGGATAGAAAGAAGGAAAGTTCAAGTCATAGGTCCTCCT
CATCTAGCCATAAGTCGTCCTCTTCCTCGTCATCCTCCTCTTCGAAGAGC
AGTTCTTCCAAGAGCTCCTCATCTTCTTCCTCTTCCCATCGCAGTTCTAG
CGATAAATACCGCGATAAAGACAAGGCTCGCTCAAGTTCCGGCTCCTCCA
GCTCGAGCAAGGACCGGGAGCGCAGCAGCGGTTCGTCTTCTTCTTCCTCG
AATAAACACAAGTCCTCAAAGTCCTCCTCGTCGTCGTCGTCGTCGTCGTC
GAGCAGCTCTGGTTCTAGTTCGTCCAAAGATCGCAAGTCGTCGTCGTCAA
CTTCGTCATCATCCTCATCCTCGAGGCAGGACAAGGACAAGGACAACAAG
CTAATGCCTCCGCCAGCTGTGGCAGCATCAAATGCTGCAGGTACATCTCC
TACAGCTTCGGCAAAGGAGAGCGACGCACAGAAGCCCAGATCGATTCCTA
TCATGTCCCGCAAGGCCTCCATTTCGATAGAAATTCGCCGGGACACCGAA
AAGACGGCCACTGTAAAGACGTACCAGTCCAAATTCAGATCGCATGGCCT
GACGGAAGAGGCTCCGCCTCCCCCATCTCGCAAGGGCCTAAAGAAGCCCA
CATCGTCGGCGGTTGCCGCTTCACCCGCTTTAATGGCAGTCCCGTCTTCA
CTGAAGCGACCATCGCCGCCACCCAGGGATTTGTCCACCGACAAGAAGGC
CAAGATCGACATCAACAACGTCGCGGGACATGTGGAGAGGCCCGGAGCCG
CCAAGCTGATAGCGCCCAAAAAGAGTAAGCAACAGATGCTAGAATCACTA
TTAATGCTCTTCTCTATTTTATTCCACAGCCCAAGAACTTTGGTGGCTTT
TGCTTTTGTTTTCGATCGGAGTCGAATGTCGAACTCCGCCGTATTATTTG
TTGATCTCCATTCCATTCTCAAGGTGTTTAATTTTGCTTGGGGCGGGTCT
TAAAAGCTTTCTAGACCAT
BS32037.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PNUTS-RA | 1887 | CG33526-PA | 1..1887 | 17..1903 | 9435 | 100 | Plus |
| PNUTS-RB | 1887 | CG33526-PB | 1..1887 | 17..1903 | 9435 | 100 | Plus |
| PNUTS-RE | 3408 | CG33526-PE | 1..1708 | 17..1724 | 8540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:36:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PNUTS-RA | 2731 | CG33526-RA | 414..2301 | 17..1904 | 9440 | 100 | Plus |
| PNUTS-RB | 2639 | CG33526-RB | 322..2209 | 17..1904 | 9440 | 100 | Plus |
| PNUTS-RE | 4030 | CG33526-RE | 322..2029 | 17..1724 | 8540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 872206..873719 | 391..1904 | 7570 | 100 | Plus |
| 2L | 23513712 | 2L | 871805..872082 | 117..394 | 1390 | 100 | Plus |
| 2L | 23513712 | 2L | 871640..871738 | 19..117 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:36:43 has no hits.
BS32037.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:24:39 Download gff for
BS32037.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PNUTS-RB | 323..2207 | 17..1901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:10:02 Download gff for
BS32037.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PNUTS-RB | 322..2206 | 17..1901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:03 Download gff for
BS32037.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PNUTS-RB | 322..2206 | 17..1901 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:03 Download gff for
BS32037.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 871639..871738 | 17..117 | 99 | -> | Plus |
| 2L | 871806..872080 | 118..392 | 100 | -> | Plus |
| 2L | 872208..873716 | 393..1901 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:10:02 Download gff for
BS32037.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 871806..872080 | 118..392 | 100 | -> | Plus |
| arm_2L | 871639..871738 | 17..117 | 99 | -> | Plus |
| arm_2L | 872208..873716 | 393..1901 | 100 | | Plus |
BS32037.pep Sequence
Translation from 16 to 1902
> BS32037.pep
MPRIVPLQLLRCLRVLLDNNGGILSAVEVKRISGLMAKYSKKLVSKCVYV
QILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLLLSP
VDVNRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTENTSMTI
QGAAPHIAATTASQVPASVSGAGSASVPDSASSSDSTDSAGAPVTYTITS
AANSSNSNSITIKWKPLLDNPDGGDETDSGTQSKDNEVEHLEKGSSATHL
LADASLGKKSGLDDSSSAAEVKSGEDVDNKKHKSSKSDKSKRSEKEREKD
RKKESSSHRSSSSSHKSSSSSSSSSSKSSSSKSSSSSSSSHRSSSDKYRD
KDKARSSSGSSSSSKDRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGS
SSSKDRKSSSSTSSSSSSSRQDKDKDNKLMPPPAVAASNAAGTSPTASAK
ESDAQKPRSIPIMSRKASISIEIRRDTEKTATVKTYQSKFRSHGLTEEAP
PPPSRKGLKKPTSSAVAASPALMAVPSSLKRPSPPPRDLSTDKKAKIDIN
NVAGHVERPGAAKLIAPKKSKQQMLESLLMLFSILFHSPRTLVAFAFVFD
RSRMSNSAVLFVDLHSILKVFNFAWGGS*
BS32037.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PNUTS-PA | 628 | CG33526-PA | 1..628 | 1..628 | 3090 | 100 | Plus |
| PNUTS-PB | 628 | CG33526-PB | 1..628 | 1..628 | 3090 | 100 | Plus |
| PNUTS-PE | 1135 | CG33526-PE | 1..569 | 1..569 | 2796 | 100 | Plus |
| PNUTS-PD | 1135 | CG33526-PD | 1..569 | 1..569 | 2796 | 100 | Plus |
| Top1-PD | 970 | CG6146-PD | 40..213 | 284..436 | 276 | 46.6 | Plus |
