BS32058.complete Sequence
2078 bp assembled on 2013-05-17
GenBank Submission: KX801994
> BS32058.complete
GAAGTTATCAGTCGACATGGTTAAAGTACAGAAACCGCAGCCCAAGTCGC
TGAACAAGAGCGCCAGCATCGAGGGCGTGGTTAAGAAAAAGGGTAAACCG
GAAAAGACCAAGAAACTGGCCACAGACGCTACTCTGGAGTTGGCCAGCAA
CAAAAAGGCAAAGAACGCGGCTCCGGTGAAAAAAGATGCCATCAAGAAGG
AGCCGGAGGTGTCCAAGAAGGGAGCCGAGAAGAAGCAGTCAAAAGCGGCC
AAGCGCCCACTAATTTTGGCTCCTCCTGAGTCGCCGGCTGCCCCCGCACC
AGCGGCGAAGAAGTCTAAGGCAAAGCCGGCCGCTTCTGGGGCTCCGGTCG
GCAAAAAGATCGAAGCCAAAAAACCTTTGATTTTGGCTCCTCCAGAATCC
CCTGTGCCACCGAAAAAGCAAGAGAAAAAGACTAAAGCTGCTCCTGTGAA
AGCCAAAAAAGAGCCAGCACCAGCAAAGAAGTCTGTGCAAGATCCCGTAC
CTTCTATTAAGAAGGTTCCTGCAGCTAAAAAGTCAGGACAAACTGCTGCA
CTAACGAAAAAGACTGCGAAAACCGAAAAACAAGCAGCACCAGCTAAACC
AGCAAAGGCTCAGCCCGCTTCGCAGCTCCAAAAGAAGGCAAAGGCGGTGC
AAAAGCTGTCTAAGCCTGCCAGTCCACCCAAATCCAAGAAGGCCCTCAGC
AAGTCCAAGCCTGGTCAGGCCAAAGGCAACGCTGTCAACAAAGAGCCTGC
CAAGTCTAAAAAACCAGTTGAGCTGACCTTCGAATTGAAGGCCTTTGACG
AGAAACGGTTCCACGAGATTGTCAATGAAAATAATGTGACGAAGGTGTGC
GCGGCATTGAAGTCTGTTGTCTCCGAGGAGGTGGAAAAGAAGAAGAACAC
CTCGATCTTCTCTGATTACCGCTATGTTTTGCAAGTTTGCAGCTACAAGA
TCCCCAGCTGCCCAAAGCGCATGGTCAAGTTGAATCTGAAGCATTCGTTG
GTGGGCAAGGACGACGATGTGGCTCTCATCGTGCCAGATTTGCAGCGTGG
AGCCAAGTTTGACTATGATCCCACCAAGCAACACTACGAGGATATGTTGC
GAGAGGCTGGTGTGAAACAGCGCCTAACCGTCGTTCCATTCAACCAGCTG
CGCAACGAGATGGGTTCCTTTGAGGCCAAGCGCAAGTTCCTCAACAGCTA
CGACTACCTGTTGTGCGACGGTCGTTTGTCAGGACAGGCTACTGCCTTTT
TGGGCAAGAACACCCAGAAGCCCCGCAACGTGCTCCACTCACTGCGTCTG
AGCAAGGACAACGATAAGCTGCCACAGGAGGTGACACGCGCCCTCACCCG
CACCGCATTCAGGCAGTTGTCAAAGGGAGATCTAATTGCCGTTCCGGTGG
GCAACCACGAGATCACCGCCGAGCAGTTGGCTGAGAACATTCTGCTGGTG
ATCAAGCAGCTCCAGGAAGTCTATCCGGGTGGACTGGCCAACATTCGTTC
GATGTACCTCAAGATCGATATCACGGGCACTAGTGCGCTGCCACTATATG
TCAGCATGTGTGCACCACCGGAGGATGTACCATATGTTGTGGGTCCTCGC
GAGCAGCGTATGCTCAAGCTTAAGAAGCAGGCCAATGAGGTGCTGTCCAA
ATTTGCCATGACCAAGGATGCGGAGTTCATTAAGCTCACCAGCGACCAGG
TCAAGCGCAAGGCCCAGTTGCGCAAAGAGAAGGCAGCACTGCTGGCTGCT
GATGCCGCTCCAAAGGACAATGATGGCGGGGACGCAGCAGTGCCCGCGAA
AAAAGCTCGCAAGGAGTCGAGCAGCGAAGGCGCAAAGGCTGATGCAGAAT
CCGATGAGGAGGAGGAAGTTGAGGAGGCAGAGGACAGTGCTGGCGAAAGT
GGCGATGAGGATGAGGAGGGACATGATGGCGATGATACTGATGAAGATGA
AGATGAAGATGACGATGACGATAATGAAGATGGTGATGACGATGAGGACG
AGGACGACGATGAGGAAGACGATGACGAGGAAGACGATGATGATGATGAC
GATGAAGAGTAAAAGCTTTCTAGACCAT
BS32058.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13096-RB | 2046 | CG13096-PB | 1..2046 | 17..2062 | 10140 | 99.7 | Plus |
| CG13096-RA | 2046 | CG13096-PA | 1..2046 | 17..2062 | 10140 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13096-RB | 2450 | CG13096-RB | 99..2144 | 17..2062 | 10140 | 99.7 | Plus |
| CG13096-RA | 2268 | CG13096-RA | 99..2144 | 17..2062 | 10140 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:36:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8510527..8511768 | 1258..17 | 6210 | 100 | Minus |
| 2L | 23513712 | 2L | 8509375..8510180 | 2062..1257 | 3940 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:36:51 has no hits.
BS32058.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:24:42 Download gff for
BS32058.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13096-RA | 77..2120 | 17..2060 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:10:06 Download gff for
BS32058.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13096-RA | 99..2142 | 17..2060 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:07 Download gff for
BS32058.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13096-RA | 99..2142 | 17..2060 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:07 Download gff for
BS32058.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8509377..8510178 | 1259..2060 | 99 | <- | Minus |
| 2L | 8510527..8511768 | 17..1258 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:10:06 Download gff for
BS32058.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8509377..8510178 | 1259..2060 | 99 | <- | Minus |
| arm_2L | 8510527..8511768 | 17..1258 | 100 | | Minus |
BS32058.pep Sequence
Translation from 16 to 2061
> BS32058.pep
MVKVQKPQPKSLNKSASIEGVVKKKGKPEKTKKLATDATLELASNKKAKN
AAPVKKDAIKKEPEVSKKGAEKKQSKAAKRPLILAPPESPAAPAPAAKKS
KAKPAASGAPVGKKIEAKKPLILAPPESPVPPKKQEKKTKAAPVKAKKEP
APAKKSVQDPVPSIKKVPAAKKSGQTAALTKKTAKTEKQAAPAKPAKAQP
ASQLQKKAKAVQKLSKPASPPKSKKALSKSKPGQAKGNAVNKEPAKSKKP
VELTFELKAFDEKRFHEIVNENNVTKVCAALKSVVSEEVEKKKNTSIFSD
YRYVLQVCSYKIPSCPKRMVKLNLKHSLVGKDDDVALIVPDLQRGAKFDY
DPTKQHYEDMLREAGVKQRLTVVPFNQLRNEMGSFEAKRKFLNSYDYLLC
DGRLSGQATAFLGKNTQKPRNVLHSLRLSKDNDKLPQEVTRALTRTAFRQ
LSKGDLIAVPVGNHEITAEQLAENILLVIKQLQEVYPGGLANIRSMYLKI
DITGTSALPLYVSMCAPPEDVPYVVGPREQRMLKLKKQANEVLSKFAMTK
DAEFIKLTSDQVKRKAQLRKEKAALLAADAAPKDNDGGDAAVPAKKARKE
SSSEGAKADAESDEEEEVEEAEDSAGESGDEDEEGHDGDDTDEDEDEDDD
DDNEDGDDDEDEDDDEEDDDEEDDDDDDDEE*
BS32058.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13096-PB | 681 | CG13096-PB | 1..681 | 1..681 | 3448 | 100 | Plus |
| CG13096-PA | 681 | CG13096-PA | 1..681 | 1..681 | 3448 | 100 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 691..834 | 539..679 | 213 | 30.1 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 691..834 | 539..679 | 213 | 30.1 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 759..863 | 583..681 | 208 | 37.1 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 759..863 | 583..681 | 208 | 37.1 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 776..878 | 579..681 | 207 | 35.2 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 776..878 | 579..681 | 207 | 35.2 | Plus |
| CG8545-PA | 891 | CG8545-PA | 24..236 | 517..681 | 204 | 28.2 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 826..936 | 583..681 | 202 | 36 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 832..940 | 584..681 | 202 | 37.6 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 826..936 | 583..681 | 202 | 36 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 832..940 | 584..681 | 202 | 37.6 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 684..793 | 583..681 | 197 | 38.2 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 684..793 | 583..681 | 197 | 38.2 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 806..887 | 600..681 | 193 | 37.8 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 806..887 | 600..681 | 193 | 37.8 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 870..972 | 584..681 | 191 | 43 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 870..972 | 584..681 | 191 | 43 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 734..807 | 609..681 | 189 | 43.2 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 734..807 | 609..681 | 189 | 43.2 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 866..958 | 583..681 | 188 | 38.4 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 866..958 | 583..681 | 188 | 38.4 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 726..808 | 598..680 | 187 | 34.9 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 808..896 | 584..681 | 187 | 32.3 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 726..808 | 598..680 | 187 | 34.9 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 808..896 | 584..681 | 187 | 32.3 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 738..819 | 600..681 | 179 | 30.5 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 738..819 | 600..681 | 179 | 30.5 | Plus |
