BS32101.complete Sequence
356 bp assembled on 2013-04-19
GenBank Submission: KX802197
> BS32101.complete
GAAGTTATCAGTCGACATGAACTATCAACATTACAGGGCCACAACGCTGG
GCAGAACGCTCCAGGACACTTTGGATGAGATGATGGAGAGGGGCGATATA
ACCAAGAAGATTGCTAATTTGGTTTTACTAAGATATGACAAGAGCATTTC
AACAGCTCTCAAGGATCATGGCACGAGCAATATGTCCTTTACGGCCGAAA
GACTGGAAACCTTTAGATGCTGCGACAATGTGTGGACTCTGATCCTAAAG
GACGCGGAGTTCCGCGAGGATCAGCATTCCTTGAAGGTCGATGTGGTCAA
AATTGTGGCCTGTCTTGGAACTGACAATGGAAATGAATAAAAGCTTTCTA
GACCAT
BS32101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIA-S-2-RA | 324 | CG11639-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIA-S-2-RA | 462 | CG11639-RA | 90..422 | 8..340 | 1635 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1011141..1011401 | 340..80 | 1275 | 99.2 | Minus |
| X | 23542271 | X | 1011474..1011554 | 88..8 | 375 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:18:13 has no hits.
BS32101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:05:31 Download gff for
BS32101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-2-RA | 99..420 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:57 Download gff for
BS32101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-2-RA | 99..420 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:43 Download gff for
BS32101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-2-RA | 99..420 | 17..338 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:43 Download gff for
BS32101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1011143..1011392 | 89..338 | 100 | <- | Minus |
| X | 1011474..1011545 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:57 Download gff for
BS32101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 905507..905578 | 17..88 | 100 | | Minus |
| arm_X | 905176..905425 | 89..338 | 100 | <- | Minus |
BS32101.pep Sequence
Translation from 16 to 339
> BS32101.pep
MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKD
HGTSNMSFTAERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACL
GTDNGNE*
BS32101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIA-S-2-PA | 107 | CG11639-PA | 1..107 | 1..107 | 558 | 100 | Plus |
| TfIIA-S-PA | 106 | CG5163-PA | 1..101 | 1..101 | 278 | 55.4 | Plus |
