BS32104.complete Sequence
782 bp assembled on 2013-04-19
GenBank Submission: KX804793
> BS32104.complete
GAAGTTATCAGTCGACATGCAGTTACTGTGCTACTTCGTCATCCTTTTCG
TTGGAATCGCACCGTGGTCATCCTTGGCCAACGATGATGGATGCAACGAA
GTGGTCTGCGGATCGGTGGTATCCAAGTGCCTCATCACCCAGAGCTGCCA
GTGCAAGTTAAATGACTGCCACTGCTGCAAGGACTGTCTAAATTGCCTTG
GCGAACTGTACATCGAGTGCTGTGGCTGCCTCGACATGTGTCCCAAGCAC
AAGGATGTCCTGCCCTCGCTGACGCCGCGCTCGGAGATTGGAGACATTGA
AGGAGTGCCCGAGCTGTTCGACACCCTAACCGCCGAGGATGACGAGGGAT
GGTCCACCATAAGGTTCTCCATGCGAGCCGGCTTCAAGCAGCGCGTTCAG
GGCGGCGCGAGTGGTGATGCCGGAAACGGAAATGGAAATGGAAATGCCGG
GTCTGCAGGTGTCACCCTATGCACCGTGATCTATGTGAACTCGTGCATTC
GGGCAAACAAGTGCCGGCAGCAGTGCGAGAGCATGGGAGCCAGTAGCTAT
CGATGGTTCCACGACGGATGCTGCGAGTGCGTCGGCGAGAATTGCCTCAA
TTATGGAATCAACGAGAGTCGCTGCCGCGGTTGTCCGGAGGATCAGGACC
AACTGCTTACCGCCGATACCGTTCCGGCGGAGGCTGAACAGGATCTGGAG
CGATTCTTTGGCAACGAGGAGATCGAGGACGAGTGGGGCTATGGCGAGGA
GGATGAATTTTCCTAAAAGCTTTCTAGACCAT
BS32104.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-RA | 750 | CG1502-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
| cv-RC | 774 | CG12410-PC | 79..189 | 92..202 | 210 | 79.3 | Plus |
| cv-RB | 774 | CG12410-PB | 79..189 | 92..202 | 210 | 79.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-RA | 887 | CG1502-RA | 37..790 | 17..770 | 3755 | 99.9 | Plus |
| cv-RC | 1742 | CG12410-RC | 846..956 | 92..202 | 210 | 79.3 | Plus |
| cv-RB | 1308 | CG12410-RB | 412..522 | 92..202 | 210 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11988159..11988912 | 770..17 | 3755 | 99.9 | Minus |
| X | 23542271 | X | 5690847..5690957 | 92..202 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:18:25 has no hits.
BS32104.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:06:26 Download gff for
BS32104.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 2..749 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:03 Download gff for
BS32104.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 37..784 | 17..764 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:47 Download gff for
BS32104.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 37..784 | 17..764 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:47 Download gff for
BS32104.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11988165..11988912 | 17..764 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:03 Download gff for
BS32104.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11882198..11882945 | 17..764 | 100 | | Minus |
BS32104.pep Sequence
Translation from 16 to 765
> BS32104.pep
MQLLCYFVILFVGIAPWSSLANDDGCNEVVCGSVVSKCLITQSCQCKLND
CHCCKDCLNCLGELYIECCGCLDMCPKHKDVLPSLTPRSEIGDIEGVPEL
FDTLTAEDDEGWSTIRFSMRAGFKQRVQGGASGDAGNGNGNGNAGSAGVT
LCTVIYVNSCIRANKCRQQCESMGASSYRWFHDGCCECVGENCLNYGINE
SRCRGCPEDQDQLLTADTVPAEAEQDLERFFGNEEIEDEWGYGEEDEFS*
BS32104.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-PA | 249 | CG1502-PA | 1..249 | 1..249 | 1397 | 100 | Plus |
| cv-PC | 257 | CG12410-PC | 25..242 | 24..230 | 540 | 43.2 | Plus |
| cv-PB | 257 | CG12410-PB | 25..242 | 24..230 | 540 | 43.2 | Plus |
| cv-PA | 257 | CG12410-PA | 25..242 | 24..230 | 540 | 43.2 | Plus |
| srw-PB | 136 | CG11582-PB | 21..128 | 82..208 | 286 | 42.7 | Plus |
