BS32109.complete Sequence
629 bp assembled on 2013-04-19
GenBank Submission: KX805780
> BS32109.complete
GAAGTTATCAGTCGACATGTGCTCCCAACTGTTCGCATTTCTGCTCCTCC
TTTTGACCGCTTTTGTGACGGGTAGAAGTACTCCACCGGCGTTGGATGAA
GACTGTGAACTGAATTCTGTAGATACAATGCATGATTTCTGCTGCGACCT
GCACGACGAGAGTCCCCAGTTTAGCGACTGCCAGATGGAGTGGCACGAAA
AGATTCCATACGAGACGGATGAAGAGGAGCAGACGTACATGTTTTGCACC
GCAGAGTGCAGTTTCAACAGTACGAACTTCTTGGGCAGGGACCGCCGTTC
ACTGAATCTCAATGAGGTAAAGGAGCACTTGGAAAGCGACCTGGTCAACG
ATGCGGACATTAAGCTTCTCTATGACACCTATGTCAAGTGCGACAAGCAT
GCGCTCTCACTGATGCCGCACAAAGGTGTGAAGCAGCTATCCAAACGTCT
TTCGCGTCTTGGCTGTCATCCGTATCCCGGACTGGTCCTCGAGTGCGTGG
CCAACGAGATGATCCTGCACTGTCCCACCAAGCGCTTCCGTCAAACAGCC
CAGTGCGAAGAGACACGCAATCATTTGAAGCAATGTATGCAGTATCTAAA
GTACAAGTCCTAGAAGCTTTCTAGACCAT
BS32109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp46a-RA | 597 | CG12905-PA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp46a-RA | 597 | CG12905-RA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10311171..10311384 | 614..401 | 1070 | 100 | Minus |
| 2R | 25286936 | 2R | 10311442..10311598 | 401..245 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 10311650..10311764 | 244..130 | 575 | 100 | Minus |
| 2R | 25286936 | 2R | 10311910..10312023 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 3290..3332 | 256..214 | 107 | 72.1 | Minus |
BS32109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:08:48 Download gff for
BS32109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp46a-RA | 1..597 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:11 Download gff for
BS32109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp46a-RA | 1..597 | 17..613 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:52 Download gff for
BS32109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp46a-RA | 1..597 | 17..613 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:52 Download gff for
BS32109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10311172..10311383 | 402..613 | 100 | <- | Minus |
| 2R | 10311442..10311598 | 245..401 | 100 | <- | Minus |
| 2R | 10311650..10311763 | 131..244 | 100 | <- | Minus |
| 2R | 10311910..10312023 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:11 Download gff for
BS32109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6198677..6198888 | 402..613 | 100 | <- | Minus |
| arm_2R | 6198947..6199103 | 245..401 | 100 | <- | Minus |
| arm_2R | 6199155..6199268 | 131..244 | 100 | <- | Minus |
| arm_2R | 6199415..6199528 | 17..130 | 100 | | Minus |
BS32109.pep Sequence
Translation from 16 to 612
> BS32109.pep
MCSQLFAFLLLLLTAFVTGRSTPPALDEDCELNSVDTMHDFCCDLHDESP
QFSDCQMEWHEKIPYETDEEEQTYMFCTAECSFNSTNFLGRDRRSLNLNE
VKEHLESDLVNDADIKLLYDTYVKCDKHALSLMPHKGVKQLSKRLSRLGC
HPYPGLVLECVANEMILHCPTKRFRQTAQCEETRNHLKQCMQYLKYKS*
BS32109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp46a-PA | 198 | CG12905-PA | 1..198 | 1..198 | 1083 | 100 | Plus |
