BS32110.complete Sequence
554 bp assembled on 2013-04-19
GenBank Submission: KX801090
> BS32110.complete
GAAGTTATCAGTCGACATGCTGCGCCACCTGCTCCGCCACGAGAACAACA
AGGTCTTCGTCCTGATCCTGCTCTACTGCGTCCTGGTCAGCATTCTGAAA
CTCTGCACGGCACAGCCGGATAGCTCTGTGGCCGCCACGGATAATGATAT
TACGCATCTTGGCGACGATTGTCAGGTGACGCCCGTCATCCATGTGCTCC
AGTATCCTGGATGTGTGCCCAAGCCGATTCCCTCGTTCGCCTGCGTGGGT
CGCTGTGCCAGTTATATCCAGGTTTCGGGCAGTAAGATCTGGCAAATGGA
GCGTTCCTGCATGTGCTGCCAGGAGTCTGGTGAGCGGGAGGCAGCCGTCT
CGCTATTCTGTCCCAAAGTGAAGCCCGGCGAGCGTAAATTCAAGAAGGTC
CTGACCAAGGCGCCATTGGAGTGCATGTGTCGGCCATGCACTTCCATTGA
GGAGTCTGGCATCATACCACAGGAAATTGCCGGCTATTCGGACGAGGGTC
CACTCAACAATCACTTCCGGCGCATTGCTCTGCAATAGAAGCTTTCTAGA
CCAT
BS32110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-RA | 522 | CG13419-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-RA | 640 | CG13419-RA | 30..556 | 13..539 | 2620 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21769926..21770195 | 270..539 | 1350 | 100 | Plus |
| 3R | 32079331 | 3R | 21769547..21769685 | 13..151 | 665 | 98.6 | Plus |
| 3R | 32079331 | 3R | 21769744..21769871 | 146..273 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:18:06 has no hits.
BS32110.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:03:28 Download gff for
BS32110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| burs-RA | 1..522 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:54 Download gff for
BS32110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| burs-RA | 34..555 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:40 Download gff for
BS32110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Burs-RA | 34..555 | 17..538 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:40 Download gff for
BS32110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21769551..21769680 | 17..146 | 100 | -> | Plus |
| 3R | 21769745..21769869 | 147..271 | 100 | -> | Plus |
| 3R | 21769928..21770194 | 272..538 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:54 Download gff for
BS32110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17595273..17595402 | 17..146 | 100 | -> | Plus |
| arm_3R | 17595467..17595591 | 147..271 | 100 | -> | Plus |
| arm_3R | 17595650..17595916 | 272..538 | 100 | | Plus |
BS32110.pep Sequence
Translation from 16 to 537
> BS32110.pep
MLRHLLRHENNKVFVLILLYCVLVSILKLCTAQPDSSVAATDNDITHLGD
DCQVTPVIHVLQYPGCVPKPIPSFACVGRCASYIQVSGSKIWQMERSCMC
CQESGEREAAVSLFCPKVKPGERKFKKVLTKAPLECMCRPCTSIEESGII
PQEIAGYSDEGPLNNHFRRIALQ*
BS32110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-PA | 173 | CG13419-PA | 1..173 | 1..173 | 930 | 100 | Plus |
