BS32112.complete Sequence
632 bp assembled on 2013-04-19
GenBank Submission: KX806222
> BS32112.complete
GAAGTTATCAGTCGACATGAAGTGCACCATTTTATTGAGTTTTTTCAGCC
TGATTTGGTTTGCTGGTGGAATTAAAATTGATTGCGAGAATACGGAGGCC
ATTAACGAGGACCACATCCACTATTGCTGCAAGCATCCCGATGGACACAA
TGATCTAATCGAAGGATGTGCCAGGGAGACCAATTTTACGCTGCCCAATC
AAAACGAGGAGGCACTGGTGGACATCACGGCGGACCGAGCCATCCGAGGC
ACTTGTTTTGGCAAATGCGTCTTTAGCAAACTGAACCTGATGAAGGACAA
CAACCTGGACATGGATGCCGTGAGAAGTTTGTTCACTGAAAGGTTTCCCG
ACGATCCGGAATATGCCAAGGAAATGATCAACGCCTTTGATCATTGTCAC
GGCAAAAGCGAAGAGAATACCTCCATGTTCCTGTCGAAGCCCCTCTTCAA
GCAAATGTCCAAGCAATTCTGCGATCCGAAGTCTAGTGTCGTCCTGGCCT
GTGTCATCCGCCAGTTCTTCCACAACTGCCCGGCGGATCGCTGGTCGAAG
ACCAAGGAGTGCGAGGATACCCTGGCCTTCAGCAAGAAGTGCCAGGACTC
GCTGGCTACTTTGTGAAAGCTTTCTAGACCAT
BS32112.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp58c-RA | 600 | CG13524-PA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp58c-RA | 691 | CG13524-RA | 19..619 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22706213..22706570 | 408..51 | 1760 | 99.4 | Minus |
2R | 25286936 | 2R | 22705944..22706157 | 617..404 | 1055 | 99.5 | Minus |
2R | 25286936 | 2R | 22706619..22706660 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:18:10 has no hits.
BS32112.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:05:20 Download gff for
BS32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp58c-RA | 1..599 | 17..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:56 Download gff for
BS32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp58c-RA | 19..617 | 17..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:42 Download gff for
BS32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp58c-RA | 19..617 | 17..615 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:42 Download gff for
BS32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22705946..22706153 | 408..615 | 100 | <- | Minus |
2R | 22706214..22706562 | 59..407 | 100 | <- | Minus |
2R | 22706619..22706660 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:56 Download gff for
BS32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18593451..18593658 | 408..615 | 100 | <- | Minus |
arm_2R | 18593719..18594067 | 59..407 | 100 | <- | Minus |
arm_2R | 18594124..18594165 | 17..58 | 100 | | Minus |
BS32112.pep Sequence
Translation from 16 to 615
> BS32112.pep
MKCTILLSFFSLIWFAGGIKIDCENTEAINEDHIHYCCKHPDGHNDLIEG
CARETNFTLPNQNEEALVDITADRAIRGTCFGKCVFSKLNLMKDNNLDMD
AVRSLFTERFPDDPEYAKEMINAFDHCHGKSEENTSMFLSKPLFKQMSKQ
FCDPKSSVVLACVIRQFFHNCPADRWSKTKECEDTLAFSKKCQDSLATL*
BS32112.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp58c-PA | 199 | CG13524-PA | 1..199 | 1..199 | 1089 | 100 | Plus |
Obp58b-PA | 203 | CG13518-PA | 22..203 | 19..199 | 584 | 54.4 | Plus |
Obp47b-PA | 199 | CG13208-PA | 22..195 | 17..192 | 168 | 24.2 | Plus |