Clone BS32114 Report

Search the DGRC for BS32114

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:321
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptPburs-RA
Protein status:BS32114.pep: full length peptide match
Sequenced Size:458

Clone Sequence Records

BS32114.complete Sequence

458 bp assembled on 2013-04-19

GenBank Submission: KX804262

> BS32114.complete
GAAGTTATCAGTCGACATGCATGTCCAGGAACTGCTCTTTGTGGCCGCGA
TCCTAGTGCCCCAATGCCTGAGGGCATTGCGATATAGCCAAGGCACTGGC
GACGAGAACTGCGAGACTCTCAAGTCGGAGATCCACTTGATCAAGGAGGA
GTTCGACGAGCTGGGCCGGATGCAGAGGACCTGCAATGCCGACGTCATCG
TCAACAAATGCGAAGGATTGTGCAACAGTCAGGTGCAACCATCGGTGATA
ACGCCCACGGGGTTTCTGAAAGAGTGCTACTGCTGCCGCGAAAGCTTCCT
CAAGGAAAAGGTCATCACTCTAACCCATTGCTATGACCCGGACGGCACCC
GTTTGACCTCTCCGGAAATGGGAAGCATGGATATACGTCTTCGGGAGCCC
ACCGAGTGCAAGTGCTTCAAATGTGGCGATTTCACACGTTAAAAGCTTTC
TAGACCAT

BS32114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-RA 426 CG15284-PA 1..426 17..442 2130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:22:24
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-RA 545 CG15284-RA 13..439 16..442 2135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14417063..14417319 272..16 1285 100 Minus
2L 23513712 2L 14416835..14417005 442..272 855 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:22:22 has no hits.

BS32114.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:55:17 Download gff for BS32114.complete
Subject Subject Range Query Range Percent Splice Strand
pburs-RA 1..424 17..440 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:01 Download gff for BS32114.complete
Subject Subject Range Query Range Percent Splice Strand
pburs-RA 14..437 17..440 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:11 Download gff for BS32114.complete
Subject Subject Range Query Range Percent Splice Strand
Pburs-RA 14..437 17..440 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:11 Download gff for BS32114.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14416837..14417005 272..440 100 <- Minus
2L 14417064..14417318 17..271 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:01 Download gff for BS32114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14416837..14417005 272..440 100 <- Minus
arm_2L 14417064..14417318 17..271 100   Minus

BS32114.pep Sequence

Translation from 16 to 441

> BS32114.pep
MHVQELLFVAAILVPQCLRALRYSQGTGDENCETLKSEIHLIKEEFDELG
RMQRTCNADVIVNKCEGLCNSQVQPSVITPTGFLKECYCCRESFLKEKVI
TLTHCYDPDGTRLTSPEMGSMDIRLREPTECKCFKCGDFTR*

BS32114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-PA 141 CG15284-PA 1..141 1..141 765 100 Plus