BS32115.complete Sequence
1511 bp assembled on 2013-04-19
GenBank Submission: KX802184
> BS32115.complete
GAAGTTATCAGTCGACATGGATACGTTTCAACTGCTTTTAGCCGTGGGAG
TGTGTTTCTGGATATACTTCCTATGGAGTCGTCGCCGGCTCTATATGATG
CACTTTAAGATACCAGGACCAATGGGATTACCAATTCTGGGCATAGCCTT
TGAGTATCTGATAACCTATAAACGTAAAATGAGCATACGAACCAAGTATA
TGGATATTTACGGCTCCACATGTTTGGTGTGGGTGGGACCGACGCCATTT
GTAATCACTCGGGATCCGAAGATTGCCGAGGAAATCTTTTTGTCCCCAGA
GTGCCTAAATAGGAGCTCGATATTTTCCAAGCCGGTTAATAGCTGTACAG
GAGATGGATTATTATCATTAGAGGCATCTAAATGGGTTGATCGTCGCAAG
AACTTAAATCCGGCATTCAAGCAAAATGTTTTGCTGAGTTTTCTTCCCAT
CTTCAATTCTGAGGCGAAAACTTTAGTTGCCTTCCTGGACTCACTTGTCG
GTCAGGGTGAAAAAAAGGTCCGCGACGACATAGTGAGATGGTCTTTTAGA
ATAGCCACTCAAACCACAGTGGGAACTGATGTAAAGAAGGATGCGTCCTT
CAAGAACGATTCAGTTTTGAAAAGTTACGAGACGTTTATGAAAATAATTG
TTATGAATGTTTTGTTGCCATTCACTCACAACAAGATATTTTCAACACTG
GGCGGATTTGAAACGCAGAAAGCTTTGGCCAAGTCCAATGTTAACAAAAT
GATAGGCACGATTGTTGACAAAAAGTTAATGACAAAGCCAGAAAGTGGCT
CACAGCCTGAAATTACCTCTGTCATTAATAAGGCCATCGAACTCCATCGG
AATGGAGAAATGTCCCGGGAAGAGGTGCAATCGGAGTGCTGTTCCTTCGT
TGTCGCTGCCTTTGAGACAACTGGTGACACGGTGTATCACGCACTCATCC
TGCTGGCCATGTTCCCGGAGCACCAGGACACGGTCTATCAGGAGCTCAAA
GAGCTGTTTCCCGTGGCCGGTGACTTTGAGGTGACCTACGACGATTTGCA
AAGGATGGTTTTTTTGGAGCGCGTGGTAAACGAAACCCTGCGTTTGATAC
CATCTGTTCCATTCACACCGAGGGAAACAATACGGGATTTCCGTCTATCC
TCTGGAGTGGTCATTCCAAAAGGAGTTGGTATTGGTATCGATATATTTGC
TACCCATCGCAACCGGGATCACTGGGGTACCGATCCATCGTCGTTCAACC
CAGATCACTTTCTGCCCGACAATGTGCGCGATAGGCATCCTTACGCATAC
ATTCCATTTTCGAAGGGAAGGCGGAATTGTATAGGTTGGAAATATGGGTT
GATGTCATCAAAGCTTGCTTTGTCTAAGATACTTAGAAACTGCAAAGTAA
GCACATCTTTTCGATACGAAGATCTCGAGTTCGTTGACAACATTGGAATG
GAACTAGCTCAGTCACCTGGACTAGAATTTCATCGGCGAACTTAAAAGCT
TTCTAGACCAT
BS32115.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:22:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp313a3-RA | 1479 | CG10093-PA | 1..1479 | 17..1495 | 7380 | 99.9 | Plus |
| Cyp313a2-RB | 1482 | CG10094-PB | 883..1451 | 899..1467 | 430 | 71.7 | Plus |
| Cyp313a1-RA | 1479 | CG3360-PA | 39..289 | 55..305 | 205 | 72.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp313a3-RA | 1777 | CG10093-RA | 157..1639 | 16..1498 | 7400 | 99.9 | Plus |
| Cyp313a2-RB | 1577 | CG10094-RB | 888..1456 | 899..1467 | 430 | 71.7 | Plus |
| Cyp313a1-RA | 1623 | CG3360-RA | 93..343 | 55..305 | 205 | 72.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:22:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12237491..12238067 | 1336..760 | 2885 | 100 | Minus |
| 3R | 32079331 | 3R | 12238688..12238888 | 374..174 | 990 | 99.5 | Minus |
| 3R | 32079331 | 3R | 12238447..12238633 | 560..374 | 935 | 100 | Minus |
| 3R | 32079331 | 3R | 12237276..12237441 | 1498..1333 | 830 | 100 | Minus |
| 3R | 32079331 | 3R | 12238951..12239110 | 175..16 | 800 | 100 | Minus |
| 3R | 32079331 | 3R | 12238121..12238247 | 760..634 | 635 | 100 | Minus |
| 3R | 32079331 | 3R | 12238307..12238381 | 635..561 | 375 | 100 | Minus |
| 3R | 32079331 | 3R | 12235305..12235742 | 1336..899 | 315 | 71.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:22:26 has no hits.
BS32115.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:56:23 Download gff for
BS32115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp313a3-RA | 1..1477 | 17..1493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:03 Download gff for
BS32115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp313a3-RA | 158..1634 | 17..1493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:13 Download gff for
BS32115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp313a3-RA | 158..1634 | 17..1493 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:13 Download gff for
BS32115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12238309..12238381 | 561..633 | 100 | <- | Minus |
| 3R | 12238447..12238632 | 375..560 | 100 | <- | Minus |
| 3R | 12238688..12238888 | 174..374 | 99 | <- | Minus |
| 3R | 12238953..12239109 | 17..173 | 100 | | Minus |
| 3R | 12237281..12237439 | 1335..1493 | 100 | <- | Minus |
| 3R | 12237493..12238066 | 761..1334 | 100 | <- | Minus |
| 3R | 12238121..12238247 | 634..760 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:03 Download gff for
BS32115.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8063003..8063161 | 1335..1493 | 100 | <- | Minus |
| arm_3R | 8063215..8063788 | 761..1334 | 100 | <- | Minus |
| arm_3R | 8063843..8063969 | 634..760 | 100 | <- | Minus |
| arm_3R | 8064031..8064103 | 561..633 | 100 | <- | Minus |
| arm_3R | 8064169..8064354 | 375..560 | 100 | <- | Minus |
| arm_3R | 8064410..8064610 | 174..374 | 99 | <- | Minus |
| arm_3R | 8064675..8064831 | 17..173 | 100 | | Minus |
BS32115.pep Sequence
Translation from 16 to 1494
> BS32115.pep
MDTFQLLLAVGVCFWIYFLWSRRRLYMMHFKIPGPMGLPILGIAFEYLIT
YKRKMSIRTKYMDIYGSTCLVWVGPTPFVITRDPKIAEEIFLSPECLNRS
SIFSKPVNSCTGDGLLSLEASKWVDRRKNLNPAFKQNVLLSFLPIFNSEA
KTLVAFLDSLVGQGEKKVRDDIVRWSFRIATQTTVGTDVKKDASFKNDSV
LKSYETFMKIIVMNVLLPFTHNKIFSTLGGFETQKALAKSNVNKMIGTIV
DKKLMTKPESGSQPEITSVINKAIELHRNGEMSREEVQSECCSFVVAAFE
TTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGDFEVTYDDLQRMVFL
ERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNR
DHWGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKL
ALSKILRNCKVSTSFRYEDLEFVDNIGMELAQSPGLEFHRRT*
BS32115.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp313a3-PA | 492 | CG10093-PA | 1..492 | 1..492 | 2575 | 100 | Plus |
| Cyp313a2-PB | 493 | CG10094-PB | 1..492 | 1..492 | 1550 | 58.9 | Plus |
| Cyp313a1-PA | 492 | CG3360-PA | 1..491 | 1..491 | 1443 | 53.6 | Plus |
| Cyp313a5-PA | 487 | CG15807-PA | 1..486 | 1..491 | 1200 | 46.6 | Plus |
| Cyp313a4-PA | 494 | CG6802-PA | 1..494 | 1..492 | 1118 | 44.3 | Plus |
