BS32118.complete Sequence
734 bp assembled on 2013-04-19
GenBank Submission: KX804770
> BS32118.complete
GAAGTTATCAGTCGACATGTACTCCTTGCAACACCCGCAAATCGATGAAT
GCTTTTTAGATTCCGAATCAACAGTTGAGGAAGTGGTCCGGTTACTCGAA
AACCTTCAAGTGCCCAATGAGGAGGAGGCGGAGGGCCAGGAAAAACCTAA
ACGGAGTCTCAAATCTTCCACTATAACAGAGGAGAGTTTCATAATTACAG
AGAGGAAAACTCCTATTCCAGTTATTTCCGCACCTACTTCTTCGAAAGAG
AAATCAAAGCCCAGAACTTTCAACCGTATAGATCGAAGTAAGGATCGATT
TCCCTTCATGCGCCAGGTGGAAATGGATCTTGATCAGCGCTCAAAAGCTC
GCTTGGAAAGGGAACGAGTGGCTCAAAACTTTCGAAAATTGGGAAACGCA
GAGTATCGAAAGGGTAACTACGAGGCTGCTATGAAAGTGTACACCGAAGC
CATCGAAAATATCCGCGACAGTCACATCCTGTACATAAATCGGGCTCTTT
GTTTCATCAAATCGGGCAAATTCAAACGAGGCATAGTCGATTGCGATTTT
GTTCTGAACAAATTGGACGAGAAGAACCTGAGGGCGTGGATGTATCGCGC
CATGGCCTACAAAGGCCTTAACGATGAGTCCAATTTTGAGAACTGTGTAA
AATATGCCCGCAAATTCAATTCGAAGCAGATGGATTTCATTGATGATTTC
CTGGAAAAGCTAAAATAAAAGCTTTCTAGACCAT
BS32118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34297-RA | 702 | CG34297-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34297-RA | 770 | CG34297-RA | 43..748 | 15..720 | 3530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6747542..6747808 | 387..121 | 1335 | 100 | Minus |
| 3R | 32079331 | 3R | 6747090..6747299 | 720..511 | 1050 | 100 | Minus |
| 3R | 32079331 | 3R | 6747367..6747489 | 510..388 | 615 | 100 | Minus |
| 3R | 32079331 | 3R | 6747859..6747965 | 121..15 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:22:35 has no hits.
BS32118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:57:47 Download gff for
BS32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34297-RA | 1..700 | 17..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:08 Download gff for
BS32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34297-RA | 1..700 | 17..716 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:17 Download gff for
BS32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34297-RA | 45..744 | 17..716 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:17 Download gff for
BS32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6747542..6747808 | 121..387 | 100 | <- | Minus |
| 3R | 6747860..6747963 | 17..120 | 100 | | Minus |
| 3R | 6747367..6747489 | 388..510 | 100 | <- | Minus |
| 3R | 6747094..6747299 | 511..716 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:08 Download gff for
BS32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2572816..2573021 | 511..716 | 100 | <- | Minus |
| arm_3R | 2573089..2573211 | 388..510 | 100 | <- | Minus |
| arm_3R | 2573264..2573530 | 121..387 | 100 | <- | Minus |
| arm_3R | 2573582..2573685 | 17..120 | 100 | | Minus |
BS32118.pep Sequence
Translation from 16 to 717
> BS32118.pep
MYSLQHPQIDECFLDSESTVEEVVRLLENLQVPNEEEAEGQEKPKRSLKS
STITEESFIITERKTPIPVISAPTSSKEKSKPRTFNRIDRSKDRFPFMRQ
VEMDLDQRSKARLERERVAQNFRKLGNAEYRKGNYEAAMKVYTEAIENIR
DSHILYINRALCFIKSGKFKRGIVDCDFVLNKLDEKNLRAWMYRAMAYKG
LNDESNFENCVKYARKFNSKQMDFIDDFLEKLK*
BS32118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34297-PA | 233 | CG34297-PA | 1..233 | 1..233 | 1200 | 100 | Plus |
| CG34274-PA | 250 | CG34274-PA | 27..247 | 1..233 | 486 | 44.4 | Plus |
| CG31294-PA | 225 | CG31294-PA | 4..222 | 10..233 | 364 | 38.5 | Plus |
| CG6980-PA | 250 | CG6980-PA | 22..242 | 6..233 | 353 | 34.3 | Plus |
| Hop-PA | 490 | CG2720-PA | 289..418 | 98..228 | 171 | 28.2 | Plus |
