Clone BS32120 Report

Search the DGRC for BS32120

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:321
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG34281-RA
Protein status:BS32120.pep: full length peptide match
Sequenced Size:353

Clone Sequence Records

BS32120.complete Sequence

353 bp assembled on 2013-04-19

GenBank Submission: KX802049

> BS32120.complete
GAAGTTATCAGTCGACATGAAGTACCTTTCATTGTCTTTCCTATTGTGCT
GCCTGGTGGCCGGAGTGTTGAGTGCCCCCCAGTTTGGATATGGATTCGCA
CCATATGGAGGATACGGAGGATACGGAGGATATGGAGGAAGCTATGCCTC
CGCCTCTGCCAGCAGCAGTGCGGGAGGATATCAAGGATTCGGATACCCAG
GATACGGGGGATATGGAGGATACGGAGGATTTGGTGGAGGATACGGTGGA
GGCTATGGGCAGCAATACAACCAGTTTAGCAACTACAACAACTACGGATC
TTCTGGCTACTACGGCGGTTACCCATTCGGCAGATGAAAGCTTTCTAGAC
CAT

BS32120.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-RA 321 CG34281-PA 1..321 17..337 1605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-RA 448 CG34281-RA 14..335 16..337 1610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17612975..17613291 21..337 1585 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:22:44 has no hits.

BS32120.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:58:21 Download gff for BS32120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 1..320 17..336 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:12 Download gff for BS32120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 1..320 17..336 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:21 Download gff for BS32120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 15..334 17..336 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:21 Download gff for BS32120.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17612969..17613290 17..336 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:12 Download gff for BS32120.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13438691..13439012 17..336 99   Plus

BS32120.pep Sequence

Translation from 16 to 336

> BS32120.pep
MKYLSLSFLLCCLVAGVLSAPQFGYGFAPYGGYGGYGGYGGSYASASASS
SAGGYQGFGYPGYGGYGGYGGFGGGYGGGYGQQYNQFSNYNNYGSSGYYG
GYPFGR*

BS32120.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-PA 106 CG34281-PA 1..106 1..106 604 100 Plus
CG8157-PB 113 CG8157-PB 1..94 4..101 166 42.7 Plus
CG8157-PA 113 CG8157-PA 1..94 4..101 166 42.7 Plus
Edg91-PB 151 CG7539-PB 41..144 24..105 160 42.9 Plus
Edg91-PA 159 CG7539-PA 49..152 24..105 160 42.9 Plus
Edg91-PB 151 CG7539-PB 58..141 16..101 151 45.7 Plus
Edg91-PB 151 CG7539-PB 50..139 23..105 146 41.4 Plus
Edg91-PB 151 CG7539-PB 28..86 37..102 145 47 Plus