BS32121.complete Sequence
659 bp assembled on 2013-04-19
GenBank Submission: KX800908
> BS32121.complete
GAAGTTATCAGTCGACATGGGCAACCGCATTGCATCCAGTAGAGGCGCCG
ATGGAGCTGGCGAGGGAGCCGCCGGCGAGGGTAACTCCAGGTTCAATACC
CGCCGCCGATATCAGCAGCACAAGAGGGAATACTGTCTGCAGAACGAGTA
CCGATCGAAGACCCTGCCCGCCCGCCATCCGCACCACAGTGATCCCCACC
AGAGCCACCAGAAGTGCAGCGCCCAGGAGCGACTGGGCTCGAGCAGTTGC
TTGGGAGCTGGCCAGAATGCATCCAACAACGCAACGCCGCACAATGGAGA
GACGTCGAGGGTGCTCTTTCTGCTCTACTTGATTCACCGCACCTGGAACG
TGGTCATGGACACGATGGACTCACGCACCAAGAGTCGTTCGGCTAGAGGG
AATTCCCCTCAAAAAGAGGGGCCCGTGGATATTGAACTCCAGCCGCGGGT
TCTGGATGAGGAATGCTCCATTGGCATCACCGACTTGGACGCCTCATCGT
TCTGCTCCCAGTACTCGTGCTGCAGCTGCAGCTACTGTGATGTGGAAACC
ACTGGGACCCAGACCAATGTCTACAGCTCAATAGGCGACGACTTTTCCCT
GGACTCCATGTTCGAGGCGGGAAAGTCGATGGTTGACAGGTGAAAGCTTT
CTAGACCAT
BS32121.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:22:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-RB | 3207 | CG43772-PB | 1..623 | 17..639 | 3115 | 100 | Plus |
| mwh-RC | 3210 | CG43772-PC | 1..626 | 17..639 | 3050 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:22:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-RB | 4063 | CG43772-RB | 568..1190 | 17..639 | 3115 | 100 | Plus |
| mwh-RC | 4066 | CG43772-RC | 568..1193 | 17..639 | 3050 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1206065..1206432 | 17..384 | 1840 | 100 | Plus |
| 3L | 28110227 | 3L | 1206529..1206789 | 383..643 | 1305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:22:48 has no hits.
BS32121.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:00:53 Download gff for
BS32121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34022-RA | 1..626 | 17..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:15 Download gff for
BS32121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mwh-RB | 568..1192 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:23 Download gff for
BS32121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mwh-RB | 568..1192 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:23 Download gff for
BS32121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1206065..1206432 | 17..384 | 100 | -> | Plus |
| 3L | 1206531..1206788 | 385..642 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:15 Download gff for
BS32121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1206065..1206432 | 17..384 | 100 | -> | Plus |
| arm_3L | 1206531..1206788 | 385..642 | 100 | | Plus |
BS32121.pep Sequence
Translation from 16 to 642
> BS32121.pep
MGNRIASSRGADGAGEGAAGEGNSRFNTRRRYQQHKREYCLQNEYRSKTL
PARHPHHSDPHQSHQKCSAQERLGSSSCLGAGQNASNNATPHNGETSRVL
FLLYLIHRTWNVVMDTMDSRTKSRSARGNSPQKEGPVDIELQPRVLDEEC
SIGITDLDASSFCSQYSCCSCSYCDVETTGTQTNVYSSIGDDFSLDSMFE
AGKSMVDR*
BS32121.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-PB | 1068 | CG43772-PB | 1..207 | 1..207 | 1108 | 100 | Plus |
| mwh-PC | 1069 | CG43772-PC | 1..208 | 1..207 | 1096 | 99.5 | Plus |
