BS32126.complete Sequence
626 bp assembled on 2013-04-19
GenBank Submission: KX806501
> BS32126.complete
GAAGTTATCAGTCGACATGTCGTCGCGTACGAGCGGATATAGTAGTGGAG
TTCGCTCTCAACGTTATCCTGGTGGGCAGTACCAGGGCAAATGGTTGGGC
CAGCAGCCTCACGGGTTTGGGGTAAAGCAAACGAGCAGTGGACTTGTCTA
CGAGGGTCACTGGCAGAAGGGTCAACGGCATGGCATCGGAAGTTTGCGTC
GCAAGGAGCTCGATGGCCGCATGGAACGCATCTACGTGGGTCAGTGGCGG
GAGAACAAGCGGAGTGGCGAGGGCAAGCAGTTCTATCCGGACGGATCCGT
CTACTTTGGTCAGTGGCTAGCGGACCAGCGAAGTGGAGAGGGCATCCTAT
GGCAGGCGGATGGCGGCATCTATGTGGGCGAGTGGCTTCGGGACAAGATG
CACGAAAAGGGTTTACTTTTCACGGCAACGGGAAATCGCTACGTGGGTCA
ATTTGAAGGAGGCTGCAAATCGGGCTCAGGTGTATTTTACCATGCCAGCA
ATGGACAGCGGATTCAGCACGGTTTTTGGAGCAAGGACATCTGTAGAACG
TCACTACTGTCCCTGCCACAAGATAAAAACAATGAATTTATGTCAAAAGC
TCTTTTGTAAAAGCTTTCTAGACCAT
BS32126.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:23:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-RA | 594 | CG14490-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-RA | 711 | CG14490-RA | 37..633 | 14..610 | 2985 | 100 | Plus |
| thr-RC | 4578 | CG5785-RC | 4338..4523 | 610..425 | 930 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17860796..17861207 | 14..425 | 2060 | 100 | Plus |
| 2R | 25286936 | 2R | 17861328..17861513 | 425..610 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:23:06 has no hits.
BS32126.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:02:23 Download gff for
BS32126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 1..592 | 17..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:22 Download gff for
BS32126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 40..631 | 17..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:30 Download gff for
BS32126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 40..631 | 17..608 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:30 Download gff for
BS32126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17860799..17861207 | 17..425 | 100 | -> | Plus |
| 2R | 17861329..17861511 | 426..608 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:22 Download gff for
BS32126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13748304..13748712 | 17..425 | 100 | -> | Plus |
| arm_2R | 13748834..13749016 | 426..608 | 100 | | Plus |
BS32126.pep Sequence
Translation from 16 to 609
> BS32126.pep
MSSRTSGYSSGVRSQRYPGGQYQGKWLGQQPHGFGVKQTSSGLVYEGHWQ
KGQRHGIGSLRRKELDGRMERIYVGQWRENKRSGEGKQFYPDGSVYFGQW
LADQRSGEGILWQADGGIYVGEWLRDKMHEKGLLFTATGNRYVGQFEGGC
KSGSGVFYHASNGQRIQHGFWSKDICRTSLLSLPQDKNNEFMSKALL*
BS32126.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-PA | 197 | CG14490-PA | 1..197 | 1..197 | 1082 | 100 | Plus |
| CG30429-PA | 305 | CG30429-PA | 17..203 | 9..181 | 412 | 45 | Plus |
| CG5458-PA | 344 | CG5458-PA | 30..180 | 24..171 | 182 | 32.1 | Plus |
| CG5458-PA | 344 | CG5458-PA | 25..141 | 42..164 | 170 | 34.1 | Plus |
| jp-PE | 1054 | CG4405-PE | 77..194 | 19..137 | 162 | 34.7 | Plus |
| rtp-PA | 198 | CG10233-PA | 25..158 | 15..170 | 161 | 32.5 | Plus |
