BS32130.complete Sequence
1067 bp assembled on 2013-04-19
GenBank Submission: KX803478
> BS32130.complete
GAAGTTATCAGTCGACATGAGCATATACAGCACGCTGATCCTTCTTTTGA
CAATAGTCTCCGGTTTCTGCAAAGGAGAAAATCATACGCGTGGCTGGCTG
CCAGAGTTCTGTGTCGTCGGCGAGCAAAAGTGTCCCAACTCGCGAGTTTC
GTTTTGGCTTTACACCAACCAAACACGCGACGATCCCATACAATTAGATC
CTTTGAATCCGCAAAAGGATGTCTTCCAGCCGCGTCTGCCACTCAAGATA
CTCATCCATGGATTTATAGGCAACAGGAACTTGACACCCAATTTGGAAGT
TAGAGATGTGCTGCTCCAAACTCAGCCTATAAATGTGATATCGGTGGACT
ATGGGACATTGGTTCGATGGCCGTGCTATTATCCTTGGGCTGTGAATAAT
GCACCAATTGTTTCTGAGTGTCTGGCCCAGATGATAAATAATCTAATCTC
AGCTGGCATCAGCAGACGTGAAGATATTCACTTGATAGGCTTCAGTTTGG
GAGCACAAGTGGCTGGAATGGTGGCCAACTATGTGAGCCAACCTCTGGCC
AGGATTACTGGACTGGATCCTGCGGGTCCTGGCTTTATGATGCAGCCCTC
CTTGCAGCAAAAACTGGATGCCAGTGATGCCGACTTTGTGGACATCATAC
ACACCGATCCGTTCTTCTTCTCGATGCTGCCGCCAATGGGTCATGCAGAC
TTTTACCCCAATCTCGACCAGCTTAATCAGCGGGGATGCAGTTACATCAG
CAACTGGAGATTTTACAACTGCAATCATTATCGGGCAGCCGTATACTACG
GCGAATCAATAATCTCGGAGAGGGGTTTTTGGGCCCAGCAATGCGGTGGA
TGGTTCGATTTCTTCTCGCAGCGGTGCAGCCACTACTCCAATATGCCCAA
TACGCAAATGGGTTACTTTGTCTCAGAAGATGCGTCTGGCTCGTACTTTC
TCACCACCCATGAGGTTGCTCCTTTTGCCAAAGGACCTCTGGTTGAAGTC
GAATTTGACGTTTCGGAACTTCGAAATTTTACGGAAATAGAATTAAGATG
AAAGCTTTCTAGACCAT
BS32130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34448-RA | 1035 | CG34448-PA | 1..1035 | 17..1051 | 5175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:23:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34448-RA | 1052 | CG34448-RA | 1..1037 | 17..1053 | 5185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2416990..2417751 | 930..169 | 3810 | 100 | Minus |
| 2L | 23513712 | 2L | 2417814..2417966 | 168..16 | 765 | 100 | Minus |
| 2L | 23513712 | 2L | 2416807..2416929 | 1053..931 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:23:21 has no hits.
BS32130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:06:08 Download gff for
BS32130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34448-RA | 1..1034 | 17..1050 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:30 Download gff for
BS32130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34448-RA | 1..1034 | 17..1050 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:34 Download gff for
BS32130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34448-RA | 1..1034 | 17..1050 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:34 Download gff for
BS32130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2416810..2416929 | 931..1050 | 100 | <- | Minus |
| 2L | 2416990..2417751 | 169..930 | 100 | <- | Minus |
| 2L | 2417814..2417965 | 17..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:30 Download gff for
BS32130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2416810..2416929 | 931..1050 | 100 | <- | Minus |
| arm_2L | 2416990..2417751 | 169..930 | 100 | <- | Minus |
| arm_2L | 2417814..2417965 | 17..168 | 100 | | Minus |
BS32130.pep Sequence
Translation from 16 to 1050
> BS32130.pep
MSIYSTLILLLTIVSGFCKGENHTRGWLPEFCVVGEQKCPNSRVSFWLYT
NQTRDDPIQLDPLNPQKDVFQPRLPLKILIHGFIGNRNLTPNLEVRDVLL
QTQPINVISVDYGTLVRWPCYYPWAVNNAPIVSECLAQMINNLISAGISR
REDIHLIGFSLGAQVAGMVANYVSQPLARITGLDPAGPGFMMQPSLQQKL
DASDADFVDIIHTDPFFFSMLPPMGHADFYPNLDQLNQRGCSYISNWRFY
NCNHYRAAVYYGESIISERGFWAQQCGGWFDFFSQRCSHYSNMPNTQMGY
FVSEDASGSYFLTTHEVAPFAKGPLVEVEFDVSELRNFTEIELR*
BS32130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34448-PA | 344 | CG34448-PA | 1..344 | 1..344 | 1864 | 100 | Plus |
| CG34447-PA | 389 | CG34447-PA | 3..322 | 5..329 | 730 | 47.7 | Plus |
| CG34447-PB | 389 | CG34447-PB | 3..322 | 5..329 | 730 | 47.7 | Plus |
| CG14034-PC | 338 | CG14034-PC | 33..311 | 39..323 | 531 | 41.8 | Plus |
| CG14034-PB | 338 | CG14034-PB | 33..311 | 39..323 | 531 | 41.8 | Plus |
