BS32133.complete Sequence
1115 bp assembled on 2013-04-19
GenBank Submission: KX802166
> BS32133.complete
GAAGTTATCAGTCGACATGACTACTAAAACTGGAACTTATAGACCTTCGG
CTAGCCTTATTGTAGCCGCCAAAGAGGATTCTTTAGAGGACTACGACTAC
AGATTATTGTTGATTAAACGAACTGAAAAAACTTCCTATGCATTGAACCA
TTGCGTCTTTCCTGGCGGCGTCTTCGATCCTATAGAAGATCAATCTGCGA
AATGGATAACTTTTTTCAAATCCTTTGGGGTGACCGATGAACAATTAAAA
ATGTGTAGGCACAATCAGGATTCTCCAAGGCCTGAGTTTCTATCCGGTGG
AGACCATATTTCAAGGGACATTGCACTGCGACTGACTGCGCTCAGGGAAA
CCTTTGAAGAGGTGGGCATCTTGATTTGCACAGAACAGGACGACATACAA
AAATGGGATTCTAAATCGGGTCATCCTAGAACCGTGCTTCTCGAGTCAAG
CGAACACTTCGAATGGCAACATCGGGTTCACAATGATGCCTCACAGTTTC
TGGAACTCTTTCGGCATTATAAAGTCATTCCCAATATCTGGTCTCTTCAG
GAATGGTCCATTTGGAGGACAGCAGCCACTGCCAATCGGAAATATGACAC
TGTTTATTATATCACCATGTTAGATAAGTACACCAGGAATATAAAGCTGC
TTCTGGAACCGCACGAGGTGGCTTCGGCCCACTGGTTGAGTCCGATCGAG
GCTTGGTCGAGCTCACAGAAAGCCATTATTTGGCTCCCGTTCATGCTGCT
CTATGACATCGCTCGTCTGATGAACTTCTATAGCTTTCAGGAGCTTCTCA
ACTTCTCCCGCCAAAGGAGCTGCAATGGAAGCACAATGGTGCAGCCCGTC
TACTATCGCTGCGATGACTGCATGTTTGGAGTTCTTCCTGGTGATGAGCT
CTATCCCAAAGAACCAGGCGCTTGTACACAAACAATTATCTTGTCGGGAT
CGGTGGACGACCTTCATCGAAAGTCCAAGCAATACAATCGCTATATCGTC
TACGACTTCCACAAGGTCGTACTGGCCTCCAATATACCGCCCTGCGATGG
GCATCTGCCACTGCAGCCTCTTGTCAATAACAAGCTAGCCAAGTTGTAGA
AGCTTTCTAGACCAT
BS32133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:23:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18094-RB | 1083 | CG18094-PB | 1..1083 | 17..1099 | 5415 | 100 | Plus |
| CG18094-RA | 1083 | CG18094-PA | 1..1083 | 17..1099 | 5415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18094-RB | 1357 | CG18094-RB | 225..1307 | 17..1099 | 5415 | 100 | Plus |
| CG18094-RA | 1196 | CG18094-RA | 64..1146 | 17..1099 | 5415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19490634..19491629 | 104..1099 | 4980 | 100 | Plus |
| 2L | 23513712 | 2L | 19490486..19490576 | 17..107 | 440 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:23:32 has no hits.
BS32133.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:08:14 Download gff for
BS32133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18094-RA | 1..1083 | 17..1099 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:37 Download gff for
BS32133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18094-RA | 64..1146 | 17..1099 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:39 Download gff for
BS32133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18094-RA | 64..1146 | 17..1099 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:39 Download gff for
BS32133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19490486..19490572 | 17..103 | 100 | -> | Plus |
| 2L | 19490634..19491629 | 104..1099 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:37 Download gff for
BS32133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19490486..19490572 | 17..103 | 100 | -> | Plus |
| arm_2L | 19490634..19491629 | 104..1099 | 100 | | Plus |
BS32133.pep Sequence
Translation from 16 to 1098
> BS32133.pep
MTTKTGTYRPSASLIVAAKEDSLEDYDYRLLLIKRTEKTSYALNHCVFPG
GVFDPIEDQSAKWITFFKSFGVTDEQLKMCRHNQDSPRPEFLSGGDHISR
DIALRLTALRETFEEVGILICTEQDDIQKWDSKSGHPRTVLLESSEHFEW
QHRVHNDASQFLELFRHYKVIPNIWSLQEWSIWRTAATANRKYDTVYYIT
MLDKYTRNIKLLLEPHEVASAHWLSPIEAWSSSQKAIIWLPFMLLYDIAR
LMNFYSFQELLNFSRQRSCNGSTMVQPVYYRCDDCMFGVLPGDELYPKEP
GACTQTIILSGSVDDLHRKSKQYNRYIVYDFHKVVLASNIPPCDGHLPLQ
PLVNNKLAKL*
BS32133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18094-PB | 360 | CG18094-PB | 1..360 | 1..360 | 1935 | 100 | Plus |
| CG18094-PA | 360 | CG18094-PA | 1..360 | 1..360 | 1935 | 100 | Plus |
| CG10195-PB | 361 | CG10195-PB | 10..349 | 8..347 | 540 | 35.3 | Plus |
| CG10195-PC | 361 | CG10195-PC | 10..349 | 8..347 | 540 | 35.3 | Plus |
| CG10194-PA | 351 | CG10194-PA | 9..348 | 9..351 | 537 | 34.9 | Plus |
