BS32139.complete Sequence
542 bp assembled on 2013-04-19
GenBank Submission: KX802778
> BS32139.complete
GAAGTTATCAGTCGACATGCCGGAAATACTGGATGCCATGGAAATGGAGG
CGCCATCCGATGTTGTGGACATCTCTGCGCGGGAGACAGCTGTCAACGTT
ATAACCATCATCGATGCCAGCAGTATAAATAATAATAATAATAATAATAA
TAATAACAATAATAATAGCAACAGTACAACCAATAATAACCACCACAACA
GCGGCGAACCGGAAACGGAAATCGGTGCAGTGCAGCTGCAGCAGCAGCAG
CAGCAACAACAACAACAGCTGCATCTTCAGCCGGCTTCGAATTTCGTTGC
CATTCCATTGTTGGAACGACGGCGTCGCAGTCACTGCCGCATCGCCCCCT
TGGCGCCGATCATCTGCATCCAGAACGGATCGCATCCGGAGGAGCTCGTC
CGCTTGTCCCGCTCGCGATCGTGCTTCCTTCGCATACGCAGGACCTTCAT
CAAACTTTTTGGCAAAATCATGGGCAGCAATAATCCCAGCGAAGCGGATC
GATACGACTATTATGACTGTGAGTAAAAGCTTTCTAGACCAT
BS32139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44422-RF | 2022 | CG44422-PF | 1..502 | 17..518 | 2510 | 100 | Plus |
| CG44422-RE | 1092 | CG44422-PE | 1..502 | 17..518 | 2510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44422-RF | 3652 | CG44422-RF | 128..636 | 10..518 | 2530 | 99.8 | Plus |
| CG44422-RE | 2047 | CG44422-RE | 128..636 | 10..518 | 2530 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11297842..11298222 | 455..75 | 1905 | 100 | Minus |
| X | 23542271 | X | 11297301..11297373 | 528..456 | 365 | 100 | Minus |
| X | 23542271 | X | 11302592..11302656 | 74..10 | 310 | 98.5 | Minus |
Blast to na_te.dros performed 2014-11-28 13:23:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2484 | 104..272 | 246 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2718..2841 | 161..284 | 195 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2298..2417 | 161..283 | 193 | 65.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 149..281 | 192 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6924 | 87..270 | 163 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2363 | 232..283 | 161 | 78.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6529..6583 | 229..281 | 135 | 74.5 | Plus |
| TART-A | 13424 | TART-A 13424bp | 11294..11336 | 242..284 | 125 | 76.7 | Plus |
| TART-A | 13424 | TART-A 13424bp | 116..158 | 242..284 | 125 | 76.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2881..2989 | 155..267 | 122 | 61.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2881..3001 | 164..285 | 121 | 58.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6438..6479 | 231..272 | 111 | 73.8 | Plus |
| BS | 5142 | BS BS 5142bp | 2041..2078 | 241..278 | 109 | 76.3 | Plus |
BS32139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:10:53 Download gff for
BS32139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34144-RA | 1..508 | 17..524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:46 Download gff for
BS32139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44422-RE | 135..638 | 17..524 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:46 Download gff for
BS32139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44422-RE | 135..638 | 17..524 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:46 Download gff for
BS32139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11297305..11297373 | 456..524 | 100 | <- | Minus |
| X | 11297842..11298222 | 75..455 | 100 | <- | Minus |
| X | 11302592..11302649 | 17..74 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:46 Download gff for
BS32139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11191875..11192255 | 75..455 | 100 | <- | Minus |
| arm_X | 11196625..11196682 | 17..74 | 100 | | Minus |
| arm_X | 11191338..11191406 | 456..524 | 100 | <- | Minus |
BS32139.pep Sequence
Translation from 16 to 525
> BS32139.pep
MPEILDAMEMEAPSDVVDISARETAVNVITIIDASSINNNNNNNNNNNNN
SNSTTNNNHHNSGEPETEIGAVQLQQQQQQQQQQLHLQPASNFVAIPLLE
RRRRSHCRIAPLAPIICIQNGSHPEELVRLSRSRSCFLRIRRTFIKLFGK
IMGSNNPSEADRYDYYDCE*
BS32139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44422-PE | 363 | CG44422-PE | 1..167 | 1..167 | 866 | 100 | Plus |
| CG44422-PF | 673 | CG44422-PF | 1..167 | 1..167 | 866 | 100 | Plus |
| Rbp9-PH | 439 | CG3151-PH | 63..125 | 20..82 | 148 | 46 | Plus |
| Rbp9-PG | 439 | CG3151-PG | 63..125 | 20..82 | 148 | 46 | Plus |
| Rbp9-PF | 439 | CG3151-PF | 63..125 | 20..82 | 148 | 46 | Plus |
