BS32141.complete Sequence
827 bp assembled on 2013-04-19
GenBank Submission: KX804173
> BS32141.complete
GAAGTTATCAGTCGACATGGACGCGGTATTGGTAGTGGAAAAATCGGAAG
TCCCGGGCATCGCTGTGCAATGTGACCTCCTTTTGCCCAACGGTCATTTG
CAAAGGACCTATGAATTCGACATAGCCGATGTTGGAATCCGACGGCGCCT
AGTGCGCCGATTCTACGGCATATTAATCCTACAGATGGCCTGCACCTTGC
CCTGCATTGAGTTGTTTCTCAAATATCCTTTGCCATACAACTTTGTTATG
CCATTATCAATGGTATTCACTGTTTTTCTGTATACGTGTTTCTACGTTTG
GAGAGATTGGAGGAGACATGGGCCTTTCAACTACTTTGTACTGCTGCTGA
GCACATTGATTGGATCCTTCAATAGGAGCGTATATCTACTTAATTTGGTG
GAGACACATTGGGTATATATTTATCCAGTCATTCTCATTATTGAAATCTT
GGGTCTAATGCTGTATTCCTCCCAGAAGCGTTTTCGGTTTACCCAGATTC
GCGGAATTTCCATAATCAGCCTCATCTTTGGGCTGTTCCTCCTCCTGGCC
TACCGACTGAACCGGATGATGGAGGTCTTCTCCGCAATGGCCTGCACCGT
GGAGGCGTGGTACATAATCTACGATACACACTACATGCTGTGCGGCCGAC
ATGGCTACAACATTGGACCAGAGGAGTTCGTCTATGCAGCATGCAACATA
CACTGCGATCTGCCAAAGGGAATGTGGCGACTGATGAAGATGCTTTTCTT
CAGCAAAATTGTCGAGGCCGTTCGCATGTTCCGTGAATGCTTTAGGACCG
AGGTATGCTGAAAGCTTTCTAGACCAT
BS32141.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34430-RA | 795 | CG34430-PA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34430-RA | 795 | CG34430-RA | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7944076..7944475 | 412..811 | 2000 | 100 | Plus |
| 2R | 25286936 | 2R | 7943664..7943900 | 179..415 | 1185 | 100 | Plus |
| 2R | 25286936 | 2R | 7943442..7943603 | 17..178 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:24:03 has no hits.
BS32141.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:13:00 Download gff for
BS32141.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34430-RA | 1..794 | 17..810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:51 Download gff for
BS32141.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34430-RA | 1..794 | 17..810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:49 Download gff for
BS32141.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34430-RA | 1..794 | 17..810 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:49 Download gff for
BS32141.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7944077..7944474 | 413..810 | 100 | | Plus |
| 2R | 7943442..7943603 | 17..178 | 100 | -> | Plus |
| 2R | 7943664..7943897 | 179..412 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:51 Download gff for
BS32141.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3830947..3831108 | 17..178 | 100 | -> | Plus |
| arm_2R | 3831169..3831402 | 179..412 | 100 | -> | Plus |
| arm_2R | 3831582..3831979 | 413..810 | 100 | | Plus |
BS32141.pep Sequence
Translation from 16 to 810
> BS32141.pep
MDAVLVVEKSEVPGIAVQCDLLLPNGHLQRTYEFDIADVGIRRRLVRRFY
GILILQMACTLPCIELFLKYPLPYNFVMPLSMVFTVFLYTCFYVWRDWRR
HGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIEILGLMLY
SSQKRFRFTQIRGISIISLIFGLFLLLAYRLNRMMEVFSAMACTVEAWYI
IYDTHYMLCGRHGYNIGPEEFVYAACNIHCDLPKGMWRLMKMLFFSKIVE
AVRMFRECFRTEVC*
BS32141.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34430-PA | 264 | CG34430-PA | 1..264 | 1..264 | 1409 | 100 | Plus |
| CG3814-PD | 239 | CG3814-PD | 15..223 | 30..232 | 198 | 28.2 | Plus |
| CG3814-PA | 239 | CG3814-PA | 15..223 | 30..232 | 198 | 28.2 | Plus |
| CG3814-PB | 244 | CG3814-PB | 20..228 | 30..232 | 198 | 28.2 | Plus |
| CG9722-PA | 264 | CG9722-PA | 50..249 | 41..232 | 189 | 26.4 | Plus |
