Clone BS32143 Report

Search the DGRC for BS32143

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:321
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG13653-RA
Protein status:BS32143.pep: gold
Sequenced Size:740

Clone Sequence Records

BS32143.complete Sequence

740 bp assembled on 2013-04-19

GenBank Submission: KX800337

> BS32143.complete
GAAGTTATCAGTCGACATGCAGTTGGGAAAAGCTATCATTCTGATTTTGC
TGGCGGCCATCCAGCAAAGCTGCCTGGCTCTCTACATCAAGAGCGCGGAG
AAGAATCCAGCCAAGACTGGGCCCAAGGACGATTGGGGCGTCTTCAAGAA
CACACTCGGACTAAGCCAAGAAAAAGTTGAACTGCTAAAATCGCAAAAGG
ACCAACAAGGCACTAAGGAGCTGCTCAATCGATTCATTCTGGAGAACCCA
AAGGCACTGCCGAAGGCCAAGCCACAACCCGATCAGTTCATGGGACTCTA
CAGATCCATCCTGAAGAAGCTGACGGCATCCAAGCGCATGCTGAAGACCT
CGTTGAACTTTGAACTGGCCGACAGGCCACACAAGACCCTAAAAAGGCCG
CGCCGTAAGATCGCCGTCAAGATGGTTTCCGATATGCCATCATGGAAGAT
CGAGAGCCTGCTGAACTCATTCTATCTGAAGCACGGAATTCCACGCAACG
CCGAGGAGCACGATTATCCCGATCTTGACATGGCCAGGGATACTGATTAC
GAATCCGATAATTTCTACGACGACGAGGGAGATGTGGGTCTAACGGCCAA
GACGCGCCAGAACACTGAGTACGGATCCTTCCAGGACCTCATTATGCAGG
CCAAGATGAACGAGTGGGAGCGGGAGAGCGAAGAAACCAAATTGCACGGC
CCCGACAATGATGACTACATCTAAAAGCTTTCTAGACCAT

BS32143.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13653-RA 708 CG13653-PA 1..708 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13653-RA 937 CG13653-RA 34..742 17..725 3545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25195786..25196336 175..725 2755 100 Plus
3R 32079331 3R 25195560..25195719 17..176 800 100 Plus
Blast to na_te.dros performed 2014-11-28 13:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Paris 1730 Dvir\Paris TV1 1730bp Derived from Z49253. 329..375 214..168 109 70.2 Minus

BS32143.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:14:28 Download gff for BS32143.complete
Subject Subject Range Query Range Percent Splice Strand
CG13653-RA 1..706 17..722 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:55 Download gff for BS32143.complete
Subject Subject Range Query Range Percent Splice Strand
CG13653-RA 34..739 17..722 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:53 Download gff for BS32143.complete
Subject Subject Range Query Range Percent Splice Strand
CG13653-RA 34..739 17..722 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:53 Download gff for BS32143.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25195560..25195719 17..176 100 -> Plus
3R 25195788..25196333 177..722 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:55 Download gff for BS32143.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21021282..21021441 17..176 100 -> Plus
arm_3R 21021510..21022055 177..722 100   Plus

BS32143.pep Sequence

Translation from 16 to 723

> BS32143.pep
MQLGKAIILILLAAIQQSCLALYIKSAEKNPAKTGPKDDWGVFKNTLGLS
QEKVELLKSQKDQQGTKELLNRFILENPKALPKAKPQPDQFMGLYRSILK
KLTASKRMLKTSLNFELADRPHKTLKRPRRKIAVKMVSDMPSWKIESLLN
SFYLKHGIPRNAEEHDYPDLDMARDTDYESDNFYDDEGDVGLTAKTRQNT
EYGSFQDLIMQAKMNEWERESEETKLHGPDNDDYI*

BS32143.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG13653-PA 235 CG13653-PA 1..235 1..235 1223 100 Plus