BS32143.complete Sequence
740 bp assembled on 2013-04-19
GenBank Submission: KX800337
> BS32143.complete
GAAGTTATCAGTCGACATGCAGTTGGGAAAAGCTATCATTCTGATTTTGC
TGGCGGCCATCCAGCAAAGCTGCCTGGCTCTCTACATCAAGAGCGCGGAG
AAGAATCCAGCCAAGACTGGGCCCAAGGACGATTGGGGCGTCTTCAAGAA
CACACTCGGACTAAGCCAAGAAAAAGTTGAACTGCTAAAATCGCAAAAGG
ACCAACAAGGCACTAAGGAGCTGCTCAATCGATTCATTCTGGAGAACCCA
AAGGCACTGCCGAAGGCCAAGCCACAACCCGATCAGTTCATGGGACTCTA
CAGATCCATCCTGAAGAAGCTGACGGCATCCAAGCGCATGCTGAAGACCT
CGTTGAACTTTGAACTGGCCGACAGGCCACACAAGACCCTAAAAAGGCCG
CGCCGTAAGATCGCCGTCAAGATGGTTTCCGATATGCCATCATGGAAGAT
CGAGAGCCTGCTGAACTCATTCTATCTGAAGCACGGAATTCCACGCAACG
CCGAGGAGCACGATTATCCCGATCTTGACATGGCCAGGGATACTGATTAC
GAATCCGATAATTTCTACGACGACGAGGGAGATGTGGGTCTAACGGCCAA
GACGCGCCAGAACACTGAGTACGGATCCTTCCAGGACCTCATTATGCAGG
CCAAGATGAACGAGTGGGAGCGGGAGAGCGAAGAAACCAAATTGCACGGC
CCCGACAATGATGACTACATCTAAAAGCTTTCTAGACCAT
BS32143.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13653-RA | 708 | CG13653-PA | 1..708 | 17..724 | 3540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13653-RA | 937 | CG13653-RA | 34..742 | 17..725 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25195786..25196336 | 175..725 | 2755 | 100 | Plus |
3R | 32079331 | 3R | 25195560..25195719 | 17..176 | 800 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:24:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 329..375 | 214..168 | 109 | 70.2 | Minus |
BS32143.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:14:28 Download gff for
BS32143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13653-RA | 1..706 | 17..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:55 Download gff for
BS32143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13653-RA | 34..739 | 17..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:53 Download gff for
BS32143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13653-RA | 34..739 | 17..722 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:53 Download gff for
BS32143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25195560..25195719 | 17..176 | 100 | -> | Plus |
3R | 25195788..25196333 | 177..722 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:55 Download gff for
BS32143.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21021282..21021441 | 17..176 | 100 | -> | Plus |
arm_3R | 21021510..21022055 | 177..722 | 100 | | Plus |
BS32143.pep Sequence
Translation from 16 to 723
> BS32143.pep
MQLGKAIILILLAAIQQSCLALYIKSAEKNPAKTGPKDDWGVFKNTLGLS
QEKVELLKSQKDQQGTKELLNRFILENPKALPKAKPQPDQFMGLYRSILK
KLTASKRMLKTSLNFELADRPHKTLKRPRRKIAVKMVSDMPSWKIESLLN
SFYLKHGIPRNAEEHDYPDLDMARDTDYESDNFYDDEGDVGLTAKTRQNT
EYGSFQDLIMQAKMNEWERESEETKLHGPDNDDYI*
BS32143.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13653-PA | 235 | CG13653-PA | 1..235 | 1..235 | 1223 | 100 | Plus |