BS32146.complete Sequence
1130 bp assembled on 2013-04-19
GenBank Submission: KX801258
> BS32146.complete
GAAGTTATCAGTCGACATGTTACCCTCTTGCTATGCCAATGGATCGATGC
TGCCGGATAATGAGGAGCTGGTCAACTCCATGCTAGCGAATCCGGATTAT
CTCAGGACCCAGGTGTCACCCAATCCGCTGGCTCCAAGTGCCGTCGGAGG
TGCGGGCATGGAGGGTCTGATGTGCGGATCGTTTTCACCGGCCTTCTACT
ACCAGGGCATCGATAGCTTTCTGGCCCTGCACAACAACATCTGGGGATTG
CCTATATCCTTTCTGCACAACTCCCATCGACCGGAAAAGCCTCCTTTCTC
CTACATTGCCCTCATCGCCATGGCCATCAGCAGTGCACCCAACCAGCGAC
TGACCCTCAGTGGAATCTACAAGTTTATCATGGATAAATTCCCATATTAC
AGGGAGAACAAGCAGGGCTGGCAGAACTCCATTCGCCACAATCTGTCCCT
CAACGACTGCTTCGTGAAGATTCCGCGGGACAAGAACACAATCGAGGATA
ACGACAGTGCTGGGAAGGGAAGCTACTGGATGCTGGACTCATCGGCATCG
GACATGTTCGAACAGGGAAACTACCGCCGGAGGAGAACGCGCAGGCAGAG
GCACTGTGGCCATCCAAATCGCTACGAGAGGGAATCGGGAAAGGATTCAA
ATGATGGCAACAGTAGTGCAGCAGAGATTCGCTCGCCCAGCGAACCGCTG
AGTGACTTCGATATCTTCTGCAACGAGCGGCCCAATTACTCCGACAGGAT
TACGGATCTGCACAGGCAGTACTTGTCCGTATCCCTGGGCTTCAACAGTC
TGTTCAACAACGAGGCCCGCGGACTCCGACCACTGCCCGAGATCAGGGAA
TGCCCAGACGATGTGGACGCCTCGTCCAGTTCCAGCAAAGCAATGCAAAG
TTCCATGGAACTGCACGAGGAGCTACATTCGCCGAGCGCCTTTACTCCTC
CTCTCAATCGACGGGAAACCTCGTCATCGGGTGCACCTGTCCTTGCCGAA
GCTTTTAATGGCATCAAGGATGTGGTGGATGCACCTGGGAGCAGTCCAGT
GGCCAGCAGCAACCGATCAAAGACCACGCTGTTTACCATCGACAATATCA
TTGGCAAGCCATAAAAGCTTTCTAGACCAT
BS32146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:23:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fd64A-RB | 1098 | CG1132-PB | 1..1098 | 17..1114 | 5490 | 100 | Plus |
fd64A-RA | 1098 | CG1132-PA | 1..1098 | 17..1114 | 5490 | 100 | Plus |
croc-RA | 1527 | CG5069-PA | 207..390 | 286..469 | 290 | 77.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:23:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fd64A-RB | 1414 | CG1132-RB | 217..1314 | 17..1114 | 5490 | 100 | Plus |
fd64A-RA | 1372 | CG1132-RA | 175..1272 | 17..1114 | 5490 | 100 | Plus |
croc-RA | 2347 | CG5069-RA | 492..675 | 286..469 | 290 | 77.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:23:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4020707..4021179 | 642..1114 | 2365 | 100 | Plus |
3L | 28110227 | 3L | 4019094..4019464 | 17..387 | 1855 | 100 | Plus |
3L | 28110227 | 3L | 4020397..4020653 | 388..644 | 1285 | 100 | Plus |
3L | 28110227 | 3L | 21475805..21475988 | 469..286 | 290 | 77.2 | Minus |
2L | 23513712 | 2L | 3826238..3826328 | 384..474 | 230 | 83.5 | Plus |
3R | 32079331 | 3R | 28583739..28583848 | 474..365 | 190 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:23:37 has no hits.
BS32146.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:08:30 Download gff for
BS32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fd64A-RA | 6..1096 | 22..1112 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:05:39 Download gff for
BS32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fd64A-RA | 180..1270 | 22..1112 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:40 Download gff for
BS32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fd64A-RA | 180..1270 | 22..1112 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:40 Download gff for
BS32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4019099..4019464 | 22..387 | 100 | -> | Plus |
3L | 4020397..4020652 | 388..643 | 100 | -> | Plus |
3L | 4020709..4021177 | 644..1112 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:05:39 Download gff for
BS32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4019099..4019464 | 22..387 | 100 | -> | Plus |
arm_3L | 4020397..4020652 | 388..643 | 100 | -> | Plus |
arm_3L | 4020709..4021177 | 644..1112 | 100 | | Plus |
BS32146.pep Sequence
Translation from 16 to 1113
> BS32146.pep
MLPSCYANGSMLPDNEELVNSMLANPDYLRTQVSPNPLAPSAVGGAGMEG
LMCGSFSPAFYYQGIDSFLALHNNIWGLPISFLHNSHRPEKPPFSYIALI
AMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFV
KIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHP
NRYERESGKDSNDGNSSAAEIRSPSEPLSDFDIFCNERPNYSDRITDLHR
QYLSVSLGFNSLFNNEARGLRPLPEIRECPDDVDASSSSSKAMQSSMELH
EELHSPSAFTPPLNRRETSSSGAPVLAEAFNGIKDVVDAPGSSPVASSNR
SKTTLFTIDNIIGKP*
BS32146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fd64A-PB | 365 | CG1132-PB | 1..365 | 1..365 | 1933 | 100 | Plus |
fd64A-PA | 365 | CG1132-PA | 1..365 | 1..365 | 1933 | 100 | Plus |
croc-PA | 508 | CG5069-PA | 63..165 | 84..192 | 353 | 58.7 | Plus |
fd96Ca-PB | 372 | CG11921-PB | 8..112 | 86..196 | 333 | 57.7 | Plus |
fd96Ca-PA | 372 | CG11921-PA | 8..112 | 86..196 | 333 | 57.7 | Plus |