BS32152.complete Sequence
1103 bp assembled on 2013-04-19
GenBank Submission: KX802102
> BS32152.complete
GAAGTTATCAGTCGACATGTTGTTCGGACTTATAGGATCATTTTTGCTTA
TGCTGCAAATAATTCTTGTGCCTTATTCAAATGGTGCAGGGTGTCAATTT
GATACGGAATGCGTGAATCTGGATAAGTGTCCCAGGACCAGAGCAGTTAT
GAACTCATCCAGGAAAAATATAATAGGTCTTAGAAGATGCGGCACTAATA
AAGTGTGCTGCCCCAAGTGGGAAACGTATCTGCCACACGATACTTGTGGA
CAATCAAGAAGAAAACCTACGAAGGGCAAAATACCGGCGCTGAATGAGTT
TCCCTGGATGGCCATGCTGTTATATGGAAATAAAAACAATTTGTCCCAGA
AGCTGGTACCAAAATGTGGTGGATCCCTAATAAACAACTGGTACGTCCTG
ACCGCAGCGCACTGCGTGGAGTATCCATTTATGGACTATCCGTATGCCCT
CAAAACAGTGAGACTGGGCGAACATAACACGTCCACAAATCCCGATCGGG
CTATTGTGAATGGAAGAAGACAGTACGCTCCTCTTTATATGGAAATTGAA
GTGGACCAAATTATTACGCATGAACAATTCAACCGGGGAAGGCGGCTGAT
AAACGACATAGCACTCGTGCGTCTTAAGTTTCCTGTGCGCTATACGAGAG
CCATCCAACCTATTTGCCTTCCAAGAGCCCAAAAATTGGCCGCGCATAAG
CGAAAGTTTCAAGCATCCGGCTGGCCAGACATGGGACAAGGAATTGCAAG
TGAGGTACTCTTGCGCAGCTTCATCGCGGAACGGCATCCAGATGTGTGCA
AATCAAATTATGACTTTAATTTGGGCAGTCAGATATGTGCTGGTGGTCTG
GATGGGAATGACACCAGTCCCGGCGATTCCGGGGGACCCTTAATGGAGAC
CGTGATACGTGGAAAGGTCACACTCACTTATGCAGCCGGCATAATCTCCT
ACGGACAGAAGCCCTGCGTACTTAAAACTTGCAAGCCAGCATTTTACACA
AAAACTTCATACTTTTTTGAATGGATAAAATCGAAATTGCAAAGTCCATT
TATCGACAGCGACAGCAAATCTCGTACTAGAAAATAAAAGCTTTCTAGAC
CAT
BS32152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8870-RA | 1071 | CG8870-PA | 1..1071 | 17..1087 | 5355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8870-RA | 1535 | CG8870-RA | 297..1369 | 15..1087 | 5365 | 100 | Plus |
| mRpS21-RB | 475 | CG32854-RB | 408..475 | 1087..1020 | 340 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13380266..13380818 | 87..639 | 2765 | 100 | Plus |
| 3R | 32079331 | 3R | 13380895..13381343 | 639..1087 | 2245 | 100 | Plus |
| 3R | 32079331 | 3R | 13380138..13380213 | 15..90 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:24:50 has no hits.
BS32152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:21:05 Download gff for
BS32152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8870-RA | 6..1062 | 22..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:11 Download gff for
BS32152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8870-RA | 6..1062 | 22..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:05 Download gff for
BS32152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8870-RA | 304..1360 | 22..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:05 Download gff for
BS32152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13380145..13380212 | 22..89 | 100 | -> | Plus |
| 3R | 13380269..13380818 | 90..639 | 100 | -> | Plus |
| 3R | 13380896..13381334 | 640..1078 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:11 Download gff for
BS32152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9205867..9205934 | 22..89 | 100 | -> | Plus |
| arm_3R | 9205991..9206540 | 90..639 | 100 | -> | Plus |
| arm_3R | 9206618..9207056 | 640..1078 | 100 | | Plus |
BS32152.pep Sequence
Translation from 16 to 1086
> BS32152.pep
MLFGLIGSFLLMLQIILVPYSNGAGCQFDTECVNLDKCPRTRAVMNSSRK
NIIGLRRCGTNKVCCPKWETYLPHDTCGQSRRKPTKGKIPALNEFPWMAM
LLYGNKNNLSQKLVPKCGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRL
GEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQIITHEQFNRGRRLINDIAL
VRLKFPVRYTRAIQPICLPRAQKLAAHKRKFQASGWPDMGQGIASEVLLR
SFIAERHPDVCKSNYDFNLGSQICAGGLDGNDTSPGDSGGPLMETVIRGK
VTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIKSKLQSPFIDSDS
KSRTRK*
BS32152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8870-PA | 356 | CG8870-PA | 1..356 | 1..356 | 1918 | 100 | Plus |
| CG31220-PB | 363 | CG31220-PB | 27..362 | 26..342 | 549 | 41 | Plus |
| CG10232-PD | 509 | CG10232-PD | 188..508 | 26..342 | 520 | 38.5 | Plus |
| CG16710-PB | 372 | CG16710-PB | 30..362 | 26..337 | 517 | 39.1 | Plus |
| CG31219-PB | 345 | CG31219-PB | 8..344 | 9..342 | 506 | 40 | Plus |
