BS32158.complete Sequence
587 bp assembled on 2013-04-19
GenBank Submission: KX806293
> BS32158.complete
GAAGTTATCAGTCGACATGGATAACTATAACCACAAGAAATTCACTGGAG
CTCTGAAGCGAAAGCGCAGCATGGATGCGGACTCTGATGACGATGTGGTC
TTCATTATGGAACAGCCGGGCCAACGCACTCCAGAGCAGCCGCAGCCTAA
GCGTCGCTTCTTCCGACCCTGGATGGATGAGTCTCCGGAAGAGGAGCAAC
CACAGCCGCCACGTAAGATTGTGGCTACATCGACACCGCCGCCACAACAA
GTGGATGGCACCTACCACGCTAACATGGTGCGCAATCACCACAAGCGCCG
CCAGCGCAGTCCACAGGAGCAACTGCGTCGGGATCGCAACACCTTGGCCA
GCCTGCGCCATCGACGCTCCCAGCAGCAACAGCAGCAGCTCATCGAACAA
CAATACCTGACCAGTCGCATTCAGCACGAGGCCAATCTGCAGCAGCAGAT
CCGCCTGAGTCTCTACTATGTGCGCTTCCTGCAGCAGGCGATGGCCTCCA
CGGAGCCACTGCCTCCCACACAGCCAAGGCACATGATGCCGCGCCAACAG
ACCACCACCCAGCATCCTTGAAAGCTTTCTAGACCAT
BS32158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16813-RB | 555 | CG16813-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG16813-RA | 555 | CG16813-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16813-RB | 902 | CG16813-RB | 234..789 | 17..572 | 2780 | 100 | Plus |
| CG16813-RA | 715 | CG16813-RA | 47..602 | 17..572 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13227853..13228408 | 17..572 | 2780 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 13:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6883 | 288..448 | 164 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6900 | 258..441 | 154 | 57.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2481 | 285..454 | 150 | 59.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6823 | 371..448 | 128 | 65.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1052..1146 | 350..447 | 121 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6802 | 371..448 | 119 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6847 | 371..448 | 118 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6799 | 368..448 | 116 | 63.4 | Plus |
BS32158.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:16:38 Download gff for
BS32158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16813-RA | 1..554 | 17..570 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:01 Download gff for
BS32158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16813-RA | 47..600 | 17..570 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:58 Download gff for
BS32158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16813-RA | 47..600 | 17..570 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:58 Download gff for
BS32158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13227853..13228406 | 17..570 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:01 Download gff for
BS32158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13227853..13228406 | 17..570 | 100 | | Plus |
BS32158.pep Sequence
Translation from 16 to 570
> BS32158.pep
MDNYNHKKFTGALKRKRSMDADSDDDVVFIMEQPGQRTPEQPQPKRRFFR
PWMDESPEEEQPQPPRKIVATSTPPPQQVDGTYHANMVRNHHKRRQRSPQ
EQLRRDRNTLASLRHRRSQQQQQQLIEQQYLTSRIQHEANLQQQIRLSLY
YVRFLQQAMASTEPLPPTQPRHMMPRQQTTTQHP*
BS32158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16813-PB | 184 | CG16813-PB | 1..184 | 1..184 | 981 | 100 | Plus |
| CG16813-PA | 184 | CG16813-PA | 1..184 | 1..184 | 981 | 100 | Plus |
| CG16815-PB | 192 | CG16815-PB | 6..171 | 3..178 | 320 | 44.5 | Plus |
