BS32159.complete Sequence
980 bp assembled on 2013-04-19
GenBank Submission: KX803884
> BS32159.complete
GAAGTTATCAGTCGACATGAGCTCAAACCACCGTCCTCTGGACGATTCGG
ATATCCTCCTAATACAAACCATCCGCGAGACGCCGTCGCTGTACGATCCC
CAGCTGCCCTCCTTTCGGCTGTCGCAGCGCAAAGAGGAGGACTGGGCAAA
AGTGGCGGATTTGCTAAACATCTCCATCTCAGACGCTCGGCGACGGTGGA
CGTGTCTGCGGGATCGCTATTCGCGGGAGCTTAAGCAGAAGCGCCTGCAT
CCGTCCGGCGAGTTTGGTCACAATGACTTCTTTCGGAAGATGGACTTCCT
GCGGGACTTTGTGCGCAAGAGACGCGAGCGCAGAGGACGCGAACGGGATC
GGGAACAAAAGCCAACCGGGTGGATGAAGGTTGATTTACAGCGACGGCGT
CGTACCCGCCTGCCTATTGACACAGAGACCTTGATCGAGGAGCAAGGTTC
GCACGCCTACGATGAGGGCGAGGAGCAGCACGACTACGACGCTAAGCTGG
AGTCTCATACCACACAATCGGAGACGTATTCGGTGGTCGTGGAGGCGGAC
GATGGGCAGGAGCCCGAACAGGAGAGCTTCGATGAGTTCCTGGGGGATGC
GGAGTGCGAGCAAAAGGTCAAGGTGGTCACAATTCATCCGGAAATCGCTG
CTCCGAATGCGACGTCCGCACCTGAGCCTATTGAGTCTAACCACGCGGAT
CTGAACTACTTGGTCTGTATGCCGCCCAATGCGAATCAGGAGCGAGAGCA
TTCCGCCCCAGAATTACCCAATCCCACGGCCGTCATCACCCAAAAGACTT
GCGAAACAGAGGACGACTTCTTTTGCAAGTCGATTGCCGCGTATTTGCGC
CAACTGTCGCGCGTGCACAAGATCAAGGCCAAGGTGGAGATGTACCAGAT
TCTAGAGAAGTACATACTGCTCGAGGAGTGCGGAAAGGGGTCGGGTGCGG
GCGGATCAGGCTAAAAGCTTTCTAGACCAT
BS32159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-RA | 948 | CG9437-PA | 1..948 | 17..964 | 4725 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-RA | 1081 | CG9437-RA | 68..1015 | 17..964 | 4725 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21168997..21169944 | 17..964 | 4725 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:24:28 has no hits.
BS32159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:18:00 Download gff for
BS32159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9437-RA | 38..983 | 17..962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:03 Download gff for
BS32159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9437-RA | 68..1013 | 17..962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:59 Download gff for
BS32159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
hng1-RA | 68..1013 | 17..962 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:59 Download gff for
BS32159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21168997..21169942 | 17..962 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:03 Download gff for
BS32159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17056502..17057447 | 17..962 | 99 | | Plus |
BS32159.pep Sequence
Translation from 16 to 963
> BS32159.pep
MSSNHRPLDDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLL
NISISDARRRWTCLRDRYSRELKQKRLHPSGEFGHNDFFRKMDFLRDFVR
KRRERRGRERDREQKPTGWMKVDLQRRRRTRLPIDTETLIEEQGSHAYDE
GEEQHDYDAKLESHTTQSETYSVVVEADDGQEPEQESFDEFLGDAECEQK
VKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPEL
PNPTAVITQKTCETEDDFFCKSIAAYLRQLSRVHKIKAKVEMYQILEKYI
LLEECGKGSGAGGSG*
BS32159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
hng1-PA | 315 | CG9437-PA | 1..315 | 1..315 | 1662 | 100 | Plus |