Clone BS32159 Report

Search the DGRC for BS32159

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:321
Well:59
Vector:pDNR-Dual
Associated Gene/Transcripthng1-RA
Protein status:BS32159.pep: full length peptide match
Sequenced Size:980

Clone Sequence Records

BS32159.complete Sequence

980 bp assembled on 2013-04-19

GenBank Submission: KX803884

> BS32159.complete
GAAGTTATCAGTCGACATGAGCTCAAACCACCGTCCTCTGGACGATTCGG
ATATCCTCCTAATACAAACCATCCGCGAGACGCCGTCGCTGTACGATCCC
CAGCTGCCCTCCTTTCGGCTGTCGCAGCGCAAAGAGGAGGACTGGGCAAA
AGTGGCGGATTTGCTAAACATCTCCATCTCAGACGCTCGGCGACGGTGGA
CGTGTCTGCGGGATCGCTATTCGCGGGAGCTTAAGCAGAAGCGCCTGCAT
CCGTCCGGCGAGTTTGGTCACAATGACTTCTTTCGGAAGATGGACTTCCT
GCGGGACTTTGTGCGCAAGAGACGCGAGCGCAGAGGACGCGAACGGGATC
GGGAACAAAAGCCAACCGGGTGGATGAAGGTTGATTTACAGCGACGGCGT
CGTACCCGCCTGCCTATTGACACAGAGACCTTGATCGAGGAGCAAGGTTC
GCACGCCTACGATGAGGGCGAGGAGCAGCACGACTACGACGCTAAGCTGG
AGTCTCATACCACACAATCGGAGACGTATTCGGTGGTCGTGGAGGCGGAC
GATGGGCAGGAGCCCGAACAGGAGAGCTTCGATGAGTTCCTGGGGGATGC
GGAGTGCGAGCAAAAGGTCAAGGTGGTCACAATTCATCCGGAAATCGCTG
CTCCGAATGCGACGTCCGCACCTGAGCCTATTGAGTCTAACCACGCGGAT
CTGAACTACTTGGTCTGTATGCCGCCCAATGCGAATCAGGAGCGAGAGCA
TTCCGCCCCAGAATTACCCAATCCCACGGCCGTCATCACCCAAAAGACTT
GCGAAACAGAGGACGACTTCTTTTGCAAGTCGATTGCCGCGTATTTGCGC
CAACTGTCGCGCGTGCACAAGATCAAGGCCAAGGTGGAGATGTACCAGAT
TCTAGAGAAGTACATACTGCTCGAGGAGTGCGGAAAGGGGTCGGGTGCGG
GCGGATCAGGCTAAAAGCTTTCTAGACCAT

BS32159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
hng1-RA 948 CG9437-PA 1..948 17..964 4725 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
hng1-RA 1081 CG9437-RA 68..1015 17..964 4725 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21168997..21169944 17..964 4725 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 13:24:28 has no hits.

BS32159.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:18:00 Download gff for BS32159.complete
Subject Subject Range Query Range Percent Splice Strand
CG9437-RA 38..983 17..962 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:03 Download gff for BS32159.complete
Subject Subject Range Query Range Percent Splice Strand
CG9437-RA 68..1013 17..962 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:27:59 Download gff for BS32159.complete
Subject Subject Range Query Range Percent Splice Strand
hng1-RA 68..1013 17..962 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:27:59 Download gff for BS32159.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21168997..21169942 17..962 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:03 Download gff for BS32159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17056502..17057447 17..962 99   Plus

BS32159.pep Sequence

Translation from 16 to 963

> BS32159.pep
MSSNHRPLDDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLL
NISISDARRRWTCLRDRYSRELKQKRLHPSGEFGHNDFFRKMDFLRDFVR
KRRERRGRERDREQKPTGWMKVDLQRRRRTRLPIDTETLIEEQGSHAYDE
GEEQHDYDAKLESHTTQSETYSVVVEADDGQEPEQESFDEFLGDAECEQK
VKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPEL
PNPTAVITQKTCETEDDFFCKSIAAYLRQLSRVHKIKAKVEMYQILEKYI
LLEECGKGSGAGGSG*

BS32159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:11:47
Subject Length Description Subject Range Query Range Score Percent Strand
hng1-PA 315 CG9437-PA 1..315 1..315 1662 100 Plus