BS32165.complete Sequence
578 bp assembled on 2013-04-19
GenBank Submission: KX801501
> BS32165.complete
GAAGTTATCAGTCGACATGCGATTCCAATTCGTCCTGGCCTTTGGTCTTA
TTGCCATCTTGGCGACCGCTTATGCTGGTGGCGATACCACAGGCACCGGC
AGCACGGGCACCGATACTACGGGGACCGGGAGCACGGGCACCGGGAGCAC
GGGCACCGGTAGCACCGGGAGCACGGGCACCGGTAGCACGGGCACTGGCA
GCACCGGGAGCACGGGCACCGGTAGCACGGGCACTGGCAGCACCGGAAGC
ACGGGTACAGGCAGCACCGGAAGTACGGCCACTGGCAGCACCGGAAGTAC
GGGATCAACCACCTCTGGCAGCCCCAGCACCTCAACTGGCTCATCCTCGA
CTAATCCGTCTCCTTCCACAACCTCGCCCTCCACATCGCCCACCACGTCC
ACCTCCCCGAGCGACTCCTCATCCTCCGGCTCCAGCAGTAGCTCTTCGTC
ATCCAAGCGGAACCGCAAGGAGAGGCGTCGTCGCTACCGACGTCGTCAGA
GACGCCAGGAGAGACGCCGTGAGAGGAGGGAGCGCCAGCGCCAGCAGCGC
CGTCGGGGCTGAAAGCTTTCTAGACCAT
BS32165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-RB | 546 | CG13560-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG13560-RA | 546 | CG13560-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
| CG13560-RB | 546 | CG13560-PB | 122..212 | 201..291 | 215 | 82.4 | Plus |
| CG13560-RA | 546 | CG13560-PA | 122..212 | 201..291 | 215 | 82.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:25:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-RB | 918 | CG13560-RB | 40..587 | 17..564 | 2740 | 100 | Plus |
| CG13560-RA | 659 | CG13560-RA | 40..587 | 17..564 | 2740 | 100 | Plus |
| CG13560-RB | 918 | CG13560-RB | 161..251 | 201..291 | 215 | 82.4 | Plus |
| CG13560-RA | 659 | CG13560-RA | 161..251 | 201..291 | 215 | 82.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:25:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23747599..23748146 | 17..564 | 2740 | 100 | Plus |
| 2R | 25286936 | 2R | 23747720..23747810 | 201..291 | 215 | 82.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:25:26 has no hits.
BS32165.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:29:46 Download gff for
BS32165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 27..571 | 17..561 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:30 Download gff for
BS32165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 27..571 | 17..561 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:17 Download gff for
BS32165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13560-RA | 40..584 | 17..561 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:17 Download gff for
BS32165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23747599..23748143 | 17..561 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:30 Download gff for
BS32165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19635122..19635666 | 17..561 | 100 | | Plus |
BS32165.pep Sequence
Translation from 16 to 561
> BS32165.pep
MRFQFVLAFGLIAILATAYAGGDTTGTGSTGTDTTGTGSTGTGSTGTGST
GSTGTGSTGTGSTGSTGTGSTGTGSTGSTGTGSTGSTATGSTGSTGSTTS
GSPSTSTGSSSTNPSPSTTSPSTSPTTSTSPSDSSSSGSSSSSSSSKRNR
KERRRRYRRRQRRQERRRERRERQRQQRRRG*
BS32165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13560-PB | 181 | CG13560-PB | 1..181 | 1..181 | 907 | 100 | Plus |
| CG13560-PA | 181 | CG13560-PA | 1..181 | 1..181 | 907 | 100 | Plus |
| CG34105-PA | 157 | CG34105-PA | 1..150 | 1..181 | 276 | 40.9 | Plus |
| CG12491-PA | 157 | CG12491-PA | 1..150 | 1..181 | 276 | 40.9 | Plus |
| CG14852-PA | 174 | CG14852-PA | 7..164 | 6..179 | 221 | 36.4 | Plus |
