BS32166.complete Sequence
866 bp assembled on 2013-04-19
GenBank Submission: KX801729
> BS32166.complete
GAAGTTATCAGTCGACATGTTTGGAGTATTGAAGTTTGGATCCATCCTGG
TGTCCCTCCTATTTCTGGCCACCAGTCATGCGGATGTTTTCGATGAGTGT
AACGATGGTAACAACCTATCCTTTGTTACTTCGCCAAAGAGTTGCGCACA
TTATATCTTCTGCAACGGCGATGAGTCATACGATGGTGAATGCGAGGATG
GCGAATACTTTAGTCAAGATATGGAAATGTGTGAGCCCATGGGCGATATC
GACTGTCGCACGGGATCGGAGGTGCAAAGGGAAAACACTACCGACAGCTC
CTCAACGGAGATTACCTCGGAGTCCAGTACGATTTCCACAGTTGTAATCA
CCACATTAGCCCCATCGGCAGTGGTCACATTACGACCATCAGTCAATCAA
AGTGGAGCCAGCAGTACGACTTCCGTATCGCCTGCTATAGAGATTATTGT
GACCAATGTGTGCCCACAACTGGATAATCAGAGTCGTATCGCATTGCTGC
CAAATCAGAACTCCTGTTCAGATTATTACATTTGCTATCGCGGTGTGGCA
CTTCCCATGAGTTGTGCCACCAGTTTGCACTTTAATTCACTCACCGGAAA
ATGCGATCATCCCGAAAACGTTAGGTGTTTGGCCATGACTTATAATCCCA
GGGAGCAGTGCAAGCGACATGTAATCGATGTTTATCCGCATTCCGACAAC
TGCAATTACTTTTACCAGTGTCGCTCTGGCTATTTGATGGTCCAGCAGTG
TCCTTTCTTCTACGGATGGGACTACGAGAAGCGATCCTGTGTAGCACTAG
GTCAAGCCAAATGCTACAACAAGCTGCAAATGCAAATGAAAATTTATTAA
AAGCTTTCTAGACCAT
BS32166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:25:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-RA | 834 | CG33985-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-RA | 860 | CG33985-RA | 6..840 | 17..851 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15526192..15526807 | 632..17 | 3080 | 100 | Minus |
| 3L | 28110227 | 3L | 15525911..15526131 | 851..631 | 1105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:25:30 has no hits.
BS32166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:29:50 Download gff for
BS32166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 7..832 | 23..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:33 Download gff for
BS32166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 12..837 | 23..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:18 Download gff for
BS32166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 12..837 | 23..848 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:18 Download gff for
BS32166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15525914..15526130 | 632..848 | 100 | <- | Minus |
| 3L | 15526193..15526801 | 23..631 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:33 Download gff for
BS32166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15519014..15519230 | 632..848 | 100 | <- | Minus |
| arm_3L | 15519293..15519901 | 23..631 | 100 | | Minus |
BS32166.pep Sequence
Translation from 16 to 849
> BS32166.pep
MFGVLKFGSILVSLLFLATSHADVFDECNDGNNLSFVTSPKSCAHYIFCN
GDESYDGECEDGEYFSQDMEMCEPMGDIDCRTGSEVQRENTTDSSSTEIT
SESSTISTVVITTLAPSAVVTLRPSVNQSGASSTTSVSPAIEIIVTNVCP
QLDNQSRIALLPNQNSCSDYYICYRGVALPMSCATSLHFNSLTGKCDHPE
NVRCLAMTYNPREQCKRHVIDVYPHSDNCNYFYQCRSGYLMVQQCPFFYG
WDYEKRSCVALGQAKCYNKLQMQMKIY*
BS32166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-PA | 277 | CG33985-PA | 1..277 | 1..277 | 1497 | 100 | Plus |
| obst-H-PA | 269 | CG33983-PA | 12..248 | 14..267 | 519 | 37.6 | Plus |
| CG13837-PA | 223 | CG13837-PA | 2..208 | 3..269 | 256 | 28.4 | Plus |
| CG33986-PB | 277 | CG33986-PB | 49..272 | 36..272 | 236 | 24.8 | Plus |
| CG33263-PA | 227 | CG33263-PA | 5..224 | 5..268 | 232 | 24.9 | Plus |
