BS32168.complete Sequence
722 bp assembled on 2013-04-19
GenBank Submission: KX805176
> BS32168.complete
GAAGTTATCAGTCGACATGGCCGATCATAACGAAGATGAAGCTGTTGGCG
GTGACCTAAACAACAATATAACAGCAAATGGGCAGGAGGAAGTGCGTCAG
CCGGAGCAGCCGCAGAACGAACTGCTGGACATGGTTTTCACGTTGGAAAG
CGAAAAACAGGCACTACTAGAGGAGTCTCGCAAACGGATCGGAGCGCTCC
GCAAAGACTTTGAGGAAGCCAAGGCGGAAAATGAGCGTTTAAAGCGGAGA
GTGGTCCAGTTGGAGCAGTCGCTCAAGCAGTCCGTCATGCTGGGCGGCAC
AGATGCTCCCAAATCACGACAAGAGCAGGAGGAGCTGCTTCTAAAGGCCA
AAACCCTGCTGTTCGAGAAGACCAAGGTGAACAAACAGCAGGAGCAGCAG
ATATCAGTGCTTAGGACACAAGTAGACTCGATTAAGGATGTGCTGCAGGT
GACCAAGGACATGTTGCAGCTAAAGACCGCCGAATGTGATCACACGCAGG
CTCGTCTGGAGAAGAGCCAGCAGTGGATCAAGGCGGAGCAAGACAAGTGT
GTGCTCACGGAGAAGAAACTAGCCATCTCCAAAGGAGTGTATGACAAGCT
GCGTTCGGAGTACGACACCCAGTCACAGATATTCAAGGATCTTAAGTCCG
CGTACGAGCAGAAGGTCAAGGTTCTCACCAAGGCTTTGGCAGAAGCCAAG
AAATAGAAGCTTTCTAGACCAT
BS32168.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:25:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5376-RA | 690 | CG5376-PA | 1..690 | 17..706 | 3450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5376-RA | 812 | CG5376-RA | 74..763 | 17..706 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22488210..22488635 | 638..213 | 2130 | 100 | Minus |
| 3R | 32079331 | 3R | 22488684..22488882 | 215..17 | 995 | 100 | Minus |
| 3R | 32079331 | 3R | 22488082..22488152 | 706..636 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:25:35 has no hits.
BS32168.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:31:09 Download gff for
BS32168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5376-RA | 74..757 | 17..700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:36 Download gff for
BS32168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5376-RA | 74..757 | 17..700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:20 Download gff for
BS32168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5376-RA | 74..757 | 17..700 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:20 Download gff for
BS32168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22488088..22488150 | 638..700 | 100 | <- | Minus |
| 3R | 22488211..22488633 | 215..637 | 100 | <- | Minus |
| 3R | 22488685..22488882 | 17..214 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:36 Download gff for
BS32168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18313810..18313872 | 638..700 | 100 | <- | Minus |
| arm_3R | 18313933..18314355 | 215..637 | 100 | <- | Minus |
| arm_3R | 18314407..18314604 | 17..214 | 100 | | Minus |
BS32168.pep Sequence
Translation from 16 to 705
> BS32168.pep
MADHNEDEAVGGDLNNNITANGQEEVRQPEQPQNELLDMVFTLESEKQAL
LEESRKRIGALRKDFEEAKAENERLKRRVVQLEQSLKQSVMLGGTDAPKS
RQEQEELLLKAKTLLFEKTKVNKQQEQQISVLRTQVDSIKDVLQVTKDML
QLKTAECDHTQARLEKSQQWIKAEQDKCVLTEKKLAISKGVYDKLRSEYD
TQSQIFKDLKSAYEQKVKVLTKALAEAKK*
BS32168.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5376-PA | 229 | CG5376-PA | 1..229 | 1..229 | 1132 | 100 | Plus |
