BS32176.complete Sequence
764 bp assembled on 2013-04-19
GenBank Submission: KX805148
> BS32176.complete
GAAGTTATCAGTCGACATGCCATCGCCCAAGAAAAGAAGTGTGGATAAAG
CGGATGGCAAGAAGGGCAAGGGTCAAGGAGCAGGCGGCGTGAAGGGATGC
TGCTGCAAGCGGTCGCAGTGCATCAAGAACTACTGCGACTGCTATCAGTC
CATGGCCATCTGCACCAAGTTCTGTCGATGCGTTGGCTGCAGGAACACAG
AGGTGCGCGAGTTGGTGGACCCCAACTCCGTGGCCAAGAATTCCAGCGCT
GTGAAAAGGCAGAAGGCGGCTGCGATGAGCGCCAAGGCAGCAGCCGCAGC
TGCCAAGGCGGGCATCGATGTCCAGGGCAAGGCGCTCCAGGTGGCGGCAT
CCACTTTGGCGTTGCCCGGCAAGGCGCTAATGACGCCGCCAAAGTATACC
CTAGTGGCTGGCAAACCACCGATGGCTAGTAGTCACATTAACCCCATACC
CATCTCACGACCCATAGCGACTGCCGCCACTCCAGCCAGGGCGGTGAAGC
AACCGGCGGAACCTCCGATGCCCGTCAATCTGATCATTCCGGTGCGGCAC
GACGATCGCAGGGATCGGAATCTCTTCGTGCAGCCGGTGAACGCGGCTCT
GCTGGAGTGCATGCTCATCCAGGCCACGGAAGCCGAACAGTTGGGCCTGA
ACGAGCTCCAAGTGTGCCAGCTGGTGCTCGAAGAGTTTATGCGCGGCTAC
AAGAACATTTTGGAGAAAATATGCGAGTACAGCAAGGATTATTATTAAAA
GCTTTCTAGACCAT
BS32176.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-RA | 732 | CG14016-PA | 1..732 | 17..748 | 3645 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-RA | 836 | CG14016-RA | 31..764 | 15..748 | 3655 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5535933..5536496 | 748..185 | 2805 | 99.8 | Minus |
| 2L | 23513712 | 2L | 5536557..5536728 | 186..15 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:25:59 has no hits.
BS32176.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:33:46 Download gff for
BS32176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 1..730 | 17..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:49 Download gff for
BS32176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 33..762 | 17..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:28 Download gff for
BS32176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 33..762 | 17..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:28 Download gff for
BS32176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5535935..5536495 | 186..746 | 99 | <- | Minus |
| 2L | 5536558..5536726 | 17..185 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:49 Download gff for
BS32176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5535935..5536495 | 186..746 | 99 | <- | Minus |
| arm_2L | 5536558..5536726 | 17..185 | 100 | | Minus |
BS32176.pep Sequence
Translation from 16 to 747
> BS32176.pep
MPSPKKRSVDKADGKKGKGQGAGGVKGCCCKRSQCIKNYCDCYQSMAICT
KFCRCVGCRNTEVRELVDPNSVAKNSSAVKRQKAAAMSAKAAAAAAKAGI
DVQGKALQVAASTLALPGKALMTPPKYTLVAGKPPMASSHINPIPISRPI
ATAATPARAVKQPAEPPMPVNLIIPVRHDDRRDRNLFVQPVNAALLECML
IQATEAEQLGLNELQVCQLVLEEFMRGYKNILEKICEYSKDYY*
BS32176.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-PA | 243 | CG14016-PA | 1..243 | 1..243 | 1267 | 100 | Plus |
| mip120-PA | 950 | CG6061-PA | 812..858 | 26..72 | 167 | 57.4 | Plus |
| mip120-PB | 952 | CG6061-PB | 814..860 | 26..72 | 167 | 57.4 | Plus |
