BS32178.complete Sequence
437 bp assembled on 2013-04-19
GenBank Submission: KX801001
> BS32178.complete
GAAGTTATCAGTCGACATGAGTAACACTCGAACAGTACACAGCAGCACAT
CAATATCAAAGATGAATTCCGCACTGCAAATCAGCTGCCTTCTCGTTGTT
CTTGGCTGCCTTTTGGGTTCAGGACACTGCCAAAGTGAAGCTGAATTCGC
GGCCAAGTCCCGAGAAATAGCCCAAGTATTCGGCAATCCCTCCGTCGATA
AATACACGAAGGCTCGCAATTTGCCCACGCTGATTGCCTTCTACGAGAAA
TACTCCAGTCGCCTACGATTGACACCTCAGGAAAGGATTAGTATCAATAA
TGCTATGAGGCAATATAAGGCACAACGAAACCAGCAAGTTGACGGAGTAT
CTGCCCAGGGAGGATGGTTGTCTGACATTATCAAGACAGCAATTTCGATC
ATTGTAAAGGCCGTTGAATGAAAGCTTTCTAGACCAT
BS32178.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Victoria-RA | 405 | CG33117-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
| TotF-RA | 378 | CG31691-PA | 70..197 | 134..261 | 190 | 76.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Victoria-RA | 522 | CG33117-RA | 1..405 | 17..421 | 2025 | 100 | Plus |
| TotF-RA | 506 | CG31691-RA | 115..242 | 134..261 | 190 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:26:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19913055..19913393 | 421..83 | 1695 | 100 | Minus |
| 2L | 23513712 | 2L | 19913449..19913516 | 84..17 | 340 | 100 | Minus |
| 2L | 23513712 | 2L | 19912079..19912206 | 261..134 | 190 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:26:04 has no hits.
BS32178.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:34:26 Download gff for
BS32178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Victoria-RA | 1..404 | 17..420 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:50 Download gff for
BS32178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Victoria-RA | 1..404 | 17..420 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:31 Download gff for
BS32178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Victoria-RA | 1..404 | 17..420 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:31 Download gff for
BS32178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19913056..19913391 | 85..420 | 100 | <- | Minus |
| 2L | 19913449..19913516 | 17..84 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:50 Download gff for
BS32178.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19913056..19913391 | 85..420 | 100 | <- | Minus |
| arm_2L | 19913449..19913516 | 17..84 | 100 | | Minus |
BS32178.pep Sequence
Translation from 16 to 420
> BS32178.pep
MSNTRTVHSSTSISKMNSALQISCLLVVLGCLLGSGHCQSEAEFAAKSRE
IAQVFGNPSVDKYTKARNLPTLIAFYEKYSSRLRLTPQERISINNAMRQY
KAQRNQQVDGVSAQGGWLSDIIKTAISIIVKAVE*
BS32178.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Victoria-PA | 134 | CG33117-PA | 1..134 | 1..134 | 668 | 100 | Plus |
| TotF-PA | 125 | CG31691-PA | 1..100 | 16..116 | 284 | 57.4 | Plus |
| TotM-PB | 131 | CG14027-PB | 1..113 | 16..126 | 204 | 38.1 | Plus |
| TotM-PA | 131 | CG14027-PA | 1..113 | 16..126 | 204 | 38.1 | Plus |
