BS32182.complete Sequence
410 bp assembled on 2013-04-19
GenBank Submission: KX802430
> BS32182.complete
GAAGTTATCAGTCGACATGAAGACAGTCATTCTATTTGGCTTCCTGCTGG
CACTTCTTGGATATTTGGAAGCAGAACATGCACAGAGTGATCCTGAATTC
ACGGCCAAGGCACGTCAAATGCTCGCAGTCTTCGGCAACTCAGAGGTCGA
TAGATACACCAAGTCCCGAAATTTGCCCGCATTGATTGAGTTCTACGAGA
AGTACTCCAGTCGTCTGCCACTGACTGTCCAGGATCGGACCTATGCCAAC
AATGTGATCAGGAGGTACCGGGCACACAACAACCAACAGGTCGATGGTGT
TCCTGCTCAGGGCGGAGTTGGTGTGGTGTTCGCGCTACTTCTTCCTTTCG
CTGTGTCAATTGTGGAAGGAATCGCCAAGGCGATCAGAGAATAGAAGCTT
TCTAGACCAT
BS32182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotF-RA | 378 | CG31691-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
| Victoria-RA | 405 | CG33117-PA | 118..245 | 86..213 | 190 | 76.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotF-RA | 506 | CG31691-RA | 46..423 | 17..394 | 1890 | 100 | Plus |
| Victoria-RA | 522 | CG33117-RA | 118..245 | 86..213 | 190 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19911898..19912253 | 394..39 | 1780 | 100 | Minus |
| 2L | 23513712 | 2L | 19913215..19913342 | 213..86 | 190 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:25:39 has no hits.
BS32182.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:32:45 Download gff for
BS32182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotF-RA | 46..423 | 17..394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:38 Download gff for
BS32182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotF-RA | 46..423 | 17..394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:22 Download gff for
BS32182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotF-RA | 46..423 | 17..394 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:22 Download gff for
BS32182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19911898..19912252 | 40..394 | 100 | <- | Minus |
| 2L | 19912310..19912332 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:38 Download gff for
BS32182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19911898..19912252 | 40..394 | 100 | <- | Minus |
| arm_2L | 19912310..19912332 | 17..39 | 100 | | Minus |
BS32182.pep Sequence
Translation from 16 to 393
> BS32182.pep
MKTVILFGFLLALLGYLEAEHAQSDPEFTAKARQMLAVFGNSEVDRYTKS
RNLPALIEFYEKYSSRLPLTVQDRTYANNVIRRYRAHNNQQVDGVPAQGG
VGVVFALLLPFAVSIVEGIAKAIRE*
BS32182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotF-PA | 125 | CG31691-PA | 1..125 | 1..125 | 626 | 100 | Plus |
| Victoria-PA | 134 | CG33117-PA | 16..116 | 1..100 | 284 | 57.4 | Plus |
| TotM-PB | 131 | CG14027-PB | 10..129 | 6..123 | 190 | 39 | Plus |
| TotM-PA | 131 | CG14027-PA | 10..129 | 6..123 | 190 | 39 | Plus |
