BS32186.complete Sequence
1694 bp assembled on 2013-05-17
GenBank Submission: KX801873
> BS32186.complete
GAAGTTATCAGTCGACATGAAGTCGATTCAATTGAGTTTTCTACTCTTGT
CAGTGCTCTTCAGCAGTTCGCATCAGCTTTCCAAGCCGGAAGATCCAACC
TATACGGCAGCAGTGGTGGAGCACAGCCAGCCAGTGGGCGATTCTCCGCG
TGCACGCACCACCTCAGCTTCGGAATCCTTTCAAAAGATCATCCGTGAAG
TCGGCGATGTGGACATCATAGTGTTTCCCGAGCACATACTCAATAGTCAG
GCCACAGCCACTTTTGTGCCCCATGAGTCGCAGAACATAACGCCCTGCTA
CCAAACGGACTATGAGCTCTTCCTCATCGAGCTATCCTGCTCGGCGAGGG
CTAACCACCTGTATGTGGTCATAAACGTGGTGGAGAAGGAACTGTGTGCC
CATGGAGCTGGTTCTGACACCTACAATCCTTGTCCATCGTCTGGCGTTCG
GTACTTCAACACAAATGTCGTGTTCGATCGAAGGGGCAGGATTGTCTCGC
GTTACAGAAAAACCCATTTGTGGCGACACGAGTATGTCTCGACATCAGTG
CTCCGATCTCCGGATATATCCATCTTTAGGACAGACTTTGGCGTAACCTT
TGGTCATTTCATCTGCTTCGACATGTTGTTCTATGATCCGGCGATGAAAT
TGGTGAAGGAGCACAAGATCACGGACATCGTGTATCCAACCTATTGGTTC
TCGGAATTGCCATTCCTTGGCGCTGTACAACTCCAAGAGGGTTGGGCATT
TGGTAATGATGTTAATGTTCTAGCCGCAGATGCCAGTAATCCCGATGGAC
GCACTTCCGGTTCGGGTATCTATGCAGGACGCGGTGGCCGATTGGTGGCG
GAGATTTTCGAGCAGCCCACCACTAAGTTGCTGATTGCGGAGGTGCCGAA
GAGGGAACATGGCCAACTGGCACCCACTTTTACGCCGATCTTCGAGCCGC
AGAGGAAAACGCAAAGATTGACTGGCCTGGCCACGTACCGGGATAATAAT
GTGGATATATTCGAAAGTGAATTGTTGGACGATGATTTTCTGAGTTTCGA
ACGCCAGTTGTGCCATGGCAGCTTTTGCTGTACCTTCTCCATCGAACGAA
AGGTCACCAGTGCCGCGGAGAACGAGTTGCCCTCCAGTGGGGCCAAGTCA
TATCGCTATAGGATCGGCGTCTACTGGGGCAACGAGACCACCGTCATTGG
CGTGGATCGCACGGAGCAGGCAACTTGTGCACTCTTTGCCTGCACGGATG
TGCGTCTCGCGAGTTGTGGCTACATCTATCCGGAGAACGAGGAGGTCATC
AATACGCATCATTTCACCAAGCTGAGTATCTCGGGCAATTTTCCAGCTGC
TCCACGTGGCCGACGATTGATCATGCCCAGCTCCTTGAATGCTCTATTTC
TGCCCGTTTCGGTTTCCGATTATGAATGGATTGAATCACCAGAGGCGGCG
AATAATCTAGACAAGACAATATTGGTCGATTTGAAACTAGCGAAGGCACA
GAACGATCTGCTAACCTTTGCCATTTGGGCCAACTACTACACCGATATAC
CCAGTACTCACAACTTGGATCACATGCAGCCGAATGGAACTCAGTCCAAT
CCTTCGACTTCCGCATCCTCGACAGTTTCGGCATTCTGGATTTTATGTGT
CCTCAACTGTTTCATCAGCGTATTATAGAAGCTTTCTAGACCAT
BS32186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:37:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Btd-RA | 1662 | CG3599-PA | 1..1662 | 17..1678 | 8280 | 99.9 | Plus |
| vanin-like-RA | 1677 | CG32754-PA | 573..626 | 580..633 | 195 | 90.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Btd-RA | 1907 | CG3599-RA | 34..1696 | 17..1679 | 8285 | 99.9 | Plus |
| vanin-like-RA | 1864 | CG32754-RA | 590..643 | 580..633 | 195 | 90.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6217479..6219083 | 1679..75 | 7995 | 99.9 | Minus |
| X | 23542271 | X | 6219235..6219294 | 76..17 | 300 | 100 | Minus |
| X | 23542271 | X | 6201853..6201906 | 633..580 | 195 | 90.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:37:04 has no hits.
BS32186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:24:49 Download gff for
BS32186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Btd-RA | 1..1662 | 17..1678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:10:13 Download gff for
BS32186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Btd-RA | 34..1695 | 17..1678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:31:13 Download gff for
BS32186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Btd-RA | 34..1695 | 17..1678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:13 Download gff for
BS32186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6217480..6219081 | 77..1678 | 99 | <- | Minus |
| X | 6219235..6219294 | 17..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:10:13 Download gff for
BS32186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6113268..6113327 | 17..76 | 100 | | Minus |
| arm_X | 6111513..6113114 | 77..1678 | 99 | <- | Minus |
BS32186.pep Sequence
Translation from 16 to 1677
> BS32186.pep
MKSIQLSFLLLSVLFSSSHQLSKPEDPTYTAAVVEHSQPVGDSPRARTTS
ASESFQKIIREVGDVDIIVFPEHILNSQATATFVPHESQNITPCYQTDYE
LFLIELSCSARANHLYVVINVVEKELCAHGAGSDTYNPCPSSGVRYFNTN
VVFDRRGRIVSRYRKTHLWRHEYVSTSVLRSPDISIFRTDFGVTFGHFIC
FDMLFYDPAMKLVKEHKITDIVYPTYWFSELPFLGAVQLQEGWAFGNDVN
VLAADASNPDGRTSGSGIYAGRGGRLVAEIFEQPTTKLLIAEVPKREHGQ
LAPTFTPIFEPQRKTQRLTGLATYRDNNVDIFESELLDDDFLSFERQLCH
GSFCCTFSIERKVTSAAENELPSSGAKSYRYRIGVYWGNETTVIGVDRTE
QATCALFACTDVRLASCGYIYPENEEVINTHHFTKLSISGNFPAAPRGRR
LIMPSSLNALFLPVSVSDYEWIESPEAANNLDKTILVDLKLAKAQNDLLT
FAIWANYYTDIPSTHNLDHMQPNGTQSNPSTSASSTVSAFWILCVLNCFI
SVL*
BS32186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:16:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Btd-PA | 553 | CG3599-PA | 1..553 | 1..553 | 2910 | 100 | Plus |
| vanin-like-PA | 558 | CG32754-PA | 8..510 | 4..508 | 830 | 39.6 | Plus |
| CG32751-PA | 517 | CG32751-PA | 13..495 | 9..510 | 759 | 37.9 | Plus |
| CG32751-PB | 525 | CG32751-PB | 13..503 | 9..510 | 740 | 37.4 | Plus |
| CG32750-PA | 523 | CG32750-PA | 25..495 | 25..510 | 619 | 36.9 | Plus |
