BS32187.complete Sequence
1265 bp assembled on 2013-04-19
GenBank Submission: KX805910
> BS32187.complete
GAAGTTATCAGTCGACATGGACACGCTGAGAGCTCTGGAGCCGCTGCACC
GCGCCTGCCAGGTGTGCAACCTATGGCCCTGGCGCCTCGCCCCCCCGCCA
GACTCGGAGGGCATCCTGCTCCGGCGATCGCGCTGGCTGGAGCTGTACGG
TTGGACCGTGCTGATAGCGGCCACCTCCTTCACCGTGTACGGCCTCTTCC
AGGAGAGCAGCGTAGAAGAGAAACAGGACTCGGAGTCCACCATCTCGAGC
ATAGGTCACACGGTTGACTTCATTCAGCTGGTGGGCATGCGGGTGGCTCA
TCTGGCTGCCCTGCTGGAGGCCCTGTGGCAGCGGCAGGCGCAGCGAGGCT
TCTTTGCGGAGCTAGGCGAGATCGATCGCCTGCTGTCCAAGGCGTTGAGG
GTGGATGTGGAGGCTATGCGCATCAATATGCGTCGCCAGACGTCGCGCCG
AGCTGTGTGGATCCTGTGGGGCTATGCGGTTAGCCAACTCCTTATCCTGG
GCGCCAAGCTGCTCTCCCGCGGAGACAGATTCCCGATCTACTGGATCAGC
TACTTGCTGCCACTGCTTGTGTGCGGATTGCGTTACTTTCAGATCTTCAA
CGCCACTCAGCTCGTGCGCCAGCGCCTGGATGTGCTCCTAGTGGCCTTGC
AGCAGCTTCAGCTGCACCAGAAAGGGCCCGCAGTGGATACTGTGCTTGAG
GAGCAGGAGGATCTGGAAGAAGCAGCAATGGATAGACTGATCGCTGTCAG
ACTCGTCTACCAACGGGTGTGGGCCCTAGTGGCCTTGCTAAACCGCTGCT
ACGGGCTCTCCATGTTGATGCAGGTGGGCAACGACTTCCTGGCTATCACC
TCCAACTGCTACTGGATGTTCCTCAACTTCCGCCAGTCGGCGGCCTCGCC
CTTCGACATCCTGCAAATCGTGGCCAGTGGCGTATGGTCTGCCCCCCACT
TGGGTAACGTGCTCGTCCTCTCACTGCTTTGCGACCGAACGGCCCAGTGC
GCGTCTCGTCTTGCCCTGTGCCTGCACCAGGTAAGCGTGGATTTAAGGAA
TGAGAGCCACAATGCTCTGATAACCCAGTTCTCGCTGCAGCTACTCCACC
AGCGGCTCCACTTCAGCGCCGCTGGCTTCTTCAACGTGGACTGCACCCTT
CTCTATACGATCGTGGGAGCCACTACCACGTACTTGATAATCCTGATTCA
GTTTCACATGAGCGAATCCACCATCGGCAGTGATTCCAACGGACAGTAGA
AGCTTTCTAGACCAT
BS32187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr2a-RB | 1233 | CG18531-PB | 1..1233 | 17..1249 | 6165 | 100 | Plus |
| Gr2a-RC | 1287 | CG18531-PC | 1..1053 | 17..1069 | 5265 | 100 | Plus |
| Gr2a-RC | 1287 | CG18531-PC | 1107..1287 | 1069..1249 | 905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:27:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr2a-RB | 1508 | CG18531-RB | 198..1435 | 12..1249 | 6175 | 99.9 | Plus |
| Gr2a-RC | 1562 | CG18531-RC | 198..1255 | 12..1069 | 5275 | 99.9 | Plus |
| futsch-RE | 22255 | CG34387-RE | 21267..22255 | 12..1000 | 4930 | 99.9 | Plus |
| Gr2a-RC | 1562 | CG18531-RC | 1309..1489 | 1069..1249 | 905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:26:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1452698..1453687 | 12..1001 | 4935 | 99.9 | Plus |
| X | 23542271 | X | 1453875..1453965 | 1069..1159 | 455 | 100 | Plus |
| X | 23542271 | X | 1454014..1454104 | 1159..1249 | 455 | 100 | Plus |
| X | 23542271 | X | 1453753..1453821 | 1001..1069 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:26:57 has no hits.
BS32187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 18:36:30 Download gff for
BS32187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr2a-RB | 1..1233 | 17..1249 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:58 Download gff for
BS32187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr2a-RB | 203..1435 | 17..1249 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:39 Download gff for
BS32187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr2a-RB | 203..1435 | 17..1249 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:39 Download gff for
BS32187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1452703..1453686 | 17..1000 | 100 | -> | Plus |
| X | 1453753..1453821 | 1001..1069 | 100 | -> | Plus |
| X | 1453876..1453965 | 1070..1159 | 100 | -> | Plus |
| X | 1454015..1454104 | 1160..1249 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:58 Download gff for
BS32187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1346736..1347719 | 17..1000 | 100 | -> | Plus |
| arm_X | 1347786..1347854 | 1001..1069 | 100 | -> | Plus |
| arm_X | 1347909..1347998 | 1070..1159 | 100 | -> | Plus |
| arm_X | 1348048..1348137 | 1160..1249 | 100 | | Plus |
BS32187.pep Sequence
Translation from 16 to 1248
> BS32187.pep
MDTLRALEPLHRACQVCNLWPWRLAPPPDSEGILLRRSRWLELYGWTVLI
AATSFTVYGLFQESSVEEKQDSESTISSIGHTVDFIQLVGMRVAHLAALL
EALWQRQAQRGFFAELGEIDRLLSKALRVDVEAMRINMRRQTSRRAVWIL
WGYAVSQLLILGAKLLSRGDRFPIYWISYLLPLLVCGLRYFQIFNATQLV
RQRLDVLLVALQQLQLHQKGPAVDTVLEEQEDLEEAAMDRLIAVRLVYQR
VWALVALLNRCYGLSMLMQVGNDFLAITSNCYWMFLNFRQSAASPFDILQ
IVASGVWSAPHLGNVLVLSLLCDRTAQCASRLALCLHQVSVDLRNESHNA
LITQFSLQLLHQRLHFSAAGFFNVDCTLLYTIVGATTTYLIILIQFHMSE
STIGSDSNGQ*
BS32187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr2a-PB | 410 | CG18531-PB | 1..410 | 1..410 | 2104 | 100 | Plus |
| Gr2a-PC | 428 | CG18531-PC | 1..428 | 1..410 | 2075 | 95.8 | Plus |
| Gr23a-PC | 370 | CG15396-PC | 62..369 | 76..405 | 188 | 25.4 | Plus |
| Gr32a-PA | 461 | CG14916-PA | 287..451 | 233..402 | 176 | 28.2 | Plus |
| Gr28b-PD | 440 | CG13788-PD | 81..421 | 73..409 | 172 | 24.9 | Plus |
